RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 MAGED1Q9Y5V3 778 aaPredicted RBP17.54■□□□□ 0.4
SNAPC3-204ENST00000461041 LRBAP50851 2863 aa17.54■□□□□ 0.4
SNAPC3-204ENST00000461041 TEX15Q9BXT5 2789 aa17.54■□□□□ 0.4
SNAPC3-204ENST00000461041 ABCA4P78363 2273 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 ARPC4-TTLL3A0A0A6YYG9 625 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 AQP12BA6NM10 295 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 M0R1B8 84 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 TRMUO75648 421 aaKnown RBP17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 SEC14L2O76054 403 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 IGHMP01871 453 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 HOXB1P14653 301 aaPredicted RBP17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 ACADSP16219 412 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 RASSF2P50749 326 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 CLRN1P58418 232 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 UBE2NP61088 152 aaKnown RBP17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 TOP3AQ13472 1001 aaPredicted RBP17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 TAF11Q15544 211 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 TMEM108Q6UXF1 575 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 AQP12AQ8IXF9 295 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 NOXO1Q8NFA2 376 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 NINJ1Q92982 152 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 MRPL13Q9BYD1 178 aaKnown RBP17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 STX18Q9P2W9 335 aaKnown RBP17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 TMCC3Q9ULS5 477 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 POFUT2Q9Y2G5 429 aa17.53■□□□□ 0.4
SNAPC3-204ENST00000461041 POLQO75417 2590 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 CENPBD1B2RD01 187 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 KRT36O76013 467 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 RAF1P04049 648 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 ZNF26P17031 533 aaPredicted RBP17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 PTAFRP25105 342 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 RPL27P61353 136 aaKnown RBP17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 TUBA1BP68363 451 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 TUBA4AP68366 448 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 FLOT2Q14254 428 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 HIST3H3Q16695 136 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 LRFN4Q6PJG9 635 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 TUBA1AQ71U36 451 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 ZNF627Q7L945 461 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 ZER1Q7Z7L7 766 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 ADGRG5Q8IZF4 528 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 SYT14Q8NB59 555 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 RSRC1Q96IZ7 334 aaKnown RBP17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 GPA33Q99795 319 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 CCM2LQ9NUG4 571 aaPredicted RBP17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 ZNF346Q9UL40 294 aaKnown RBP17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 POMPQ9Y244 141 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 SIGLEC7Q9Y286 467 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 LYVE1Q9Y5Y7 322 aa17.52■□□□□ 0.4
SNAPC3-204ENST00000461041 UNC119BA6NIH7 251 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 ABCD4O14678 606 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 OR10H3O60404 316 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 PTP4A3O75365 173 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 ATE1O95260 518 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 QDPRP09417 244 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 RAP2AP10114 183 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 DNASE1P24855 282 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 CD40P25942 277 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 RPL4P36578 427 aaKnown RBP17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 HMGA2P52926 109 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 IST1P53990 364 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 KEAP1Q14145 624 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 ADAM5Q6NVV9 412 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 ZNF813Q6ZN06 617 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 ALPK2Q86TB3 2170 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 KBTBD8Q8NFY9 601 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 LILRB1Q8NHL6 650 aaPredicted RBP17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 CANT1Q8WVQ1 401 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 AKAP1Q92667 903 aaKnown RBP eCLIP17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 HDAC2Q92769 488 aaKnown RBP17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 MCHR2Q969V1 340 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 TSPAN32Q96QS1 320 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 FOXB1Q99853 325 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 KATNB1Q9BVA0 655 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 NDEL1Q9GZM8 345 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 SLC7A8Q9UHI5 535 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 ITGB1BP2Q9UKP3 347 aa17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 RAI1Q7Z5J4 1906 aaPredicted RBP17.51■□□□□ 0.39
SNAPC3-204ENST00000461041 CSMD2Q7Z408 3487 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 DHRS12A0PJE2 317 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 TNFRSF11BO00300 401 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 HS3ST1O14792 307 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 DHHO43323 396 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 NDUFB2O95178 105 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 PAX7P23759 505 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 ACVR1BP36896 505 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 IFNGR2P38484 337 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 ERVK-25P63136 954 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 MYBPC1Q00872 1141 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 FAM205BPQ63HN1 556 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 OR2T5Q6IEZ7 315 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 CCDC36Q8IYA8 594 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 OR2T29Q8NH02 315 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 ZNF519Q8TB69 540 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 NEUROG1Q92886 237 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 KCNK17Q96T54 332 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 MGAT4BQ9UQ53 548 aa17.5■□□□□ 0.39
SNAPC3-204ENST00000461041 ANKRD17O75179 2603 aaKnown RBP17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 ZNF503-AS2A6NEH8 195 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 SHISA9B4DS77 424 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms