RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CCDC130P13994 396 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 DRD3P35462 400 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 DLX1P56177 255 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 SEC61GP60059 68 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 TIMM10P62072 90 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 SELENOTP62341 195 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 NSDHLQ15738 373 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 MICBQ29980 383 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 CEP55Q53EZ4 464 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 TIGD3Q6B0B8 471 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 CTRB2Q6GPI1 263 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 UQCC3Q6UW78 93 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 USP50Q70EL3 339 aaPredicted RBP2.25□□□□□ -2.05
RFC4-211ENST00000460408 DCAF4L2Q8NA75 395 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 FAM83FQ8NEG4 500 aaPredicted RBP2.25□□□□□ -2.05
RFC4-211ENST00000460408 FAM110BQ8TC76 370 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 UCN3Q969E3 161 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 MYDGFQ969H8 173 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 C10orf35Q96D05 121 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 TM4SF19Q96DZ7 209 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 CLCC1Q96S66 551 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 TRIM62Q9BVG3 475 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 ASB8Q9H765 288 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 SEC14L3Q9UDX4 400 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 ZNF639Q9UID6 485 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 SETXQ7Z333 2677 aaKnown RBP2.25□□□□□ -2.05
RFC4-211ENST00000460408 CENPFP49454 3210 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 TPRP12270 2363 aaKnown RBP2.25□□□□□ -2.05
RFC4-211ENST00000460408 C4AP0C0L4 1744 aa2.25□□□□□ -2.05
RFC4-211ENST00000460408 CCDC88AQ3V6T2 1871 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 PALLDQ8WX93 1383 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 PLEKHH1Q9ULM0 1364 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 NSG1A0A0A6YYJ2 146 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 IQANK1A0A1B0GTG1 560 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 A0A1W2PPV9 198 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 PINLYPA6NC86 204 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 OR52A4PA6NMU1 304 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 A8MXQ7 604 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 HIP1O00291 1037 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 AGPAT2O15120 278 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 OXSR1O95747 527 aaPredicted RBP2.24□□□□□ -2.05
RFC4-211ENST00000460408 GAPDHP04406 335 aaKnown RBP2.24□□□□□ -2.05
RFC4-211ENST00000460408 KLK3P07288 261 aaPredicted RBP2.24□□□□□ -2.05
RFC4-211ENST00000460408 CHTF8P0CG12 524 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 IL12AP29459 219 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 PRDX3P30048 256 aaKnown RBP2.24□□□□□ -2.05
RFC4-211ENST00000460408 TAS2R19P59542 299 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 DGUOKQ16854 277 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 SAMD4BQ5PRF9 694 aaKnown RBP2.24□□□□□ -2.05
RFC4-211ENST00000460408 OR2A2Q6IF42 318 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 ENPP6Q6UWR7 440 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 TMIGD1Q6UXZ0 262 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 HSDL2Q6YN16 418 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 SMIM5Q71RC9 77 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 SLC26A11Q86WA9 606 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 RALGPS2Q86X27 583 aaPredicted RBP2.24□□□□□ -2.05
RFC4-211ENST00000460408 CCDC65Q8IXS2 484 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 PNKDQ8N490 385 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 OR1L4Q8NGR5 311 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 RNF138Q8WVD3 245 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 SHC3Q92529 594 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 NT5C3BQ969T7 300 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 CXorf40BQ96DE9 158 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 MBOAT4Q96T53 435 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 ZBTB18Q99592 522 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 NRIP2Q9BQI9 281 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 DEFB127Q9H1M4 99 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 RNF167Q9H6Y7 350 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 NIPAL2Q9H841 368 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 POLE4Q9NR33 117 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 CLCF1Q9UBD9 225 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 MTRF1LQ9UGC7 380 aaKnown RBP2.24□□□□□ -2.05
RFC4-211ENST00000460408 LAMA2P24043 3122 aaKnown RBP2.24□□□□□ -2.05
RFC4-211ENST00000460408 FAM208BQ5VWN6 2430 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 C4BP0C0L5 1744 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 DICER1Q9UPY3 1922 aaKnown RBP2.24□□□□□ -2.05
RFC4-211ENST00000460408 SPTBN4Q9H254 2564 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 QRICH2Q9H0J4 1663 aa2.24□□□□□ -2.05
RFC4-211ENST00000460408 SMG6Q86US8 1419 aaKnown RBP2.24□□□□□ -2.05
RFC4-211ENST00000460408 ADAMTSL1Q8N6G6 1762 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 NAV2Q8IVL1 2488 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 TDRD6O60522 2096 aaKnown RBP2.23□□□□□ -2.05
RFC4-211ENST00000460408 A0A1B0GVL5 298 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 FOXE1O00358 373 aaPredicted RBP2.23□□□□□ -2.05
RFC4-211ENST00000460408 B4GALT2O60909 372 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 MOSP00540 346 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 MDKP21741 143 aaPredicted RBP2.23□□□□□ -2.05
RFC4-211ENST00000460408 NUDT1P36639 197 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 TAGLN2P37802 199 aaKnown RBP2.23□□□□□ -2.05
RFC4-211ENST00000460408 GLP1RP43220 463 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 VDAC2P45880 294 aaPredicted RBP2.23□□□□□ -2.05
RFC4-211ENST00000460408 GSSP48637 474 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 ARRB1P49407 418 aaPredicted RBP2.23□□□□□ -2.05
RFC4-211ENST00000460408 PRPS1P60891 318 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 OGDHQ02218 1023 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 OR5I1Q13606 314 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 ARFRP1Q13795 201 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 ATP6AP1Q15904 470 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 MARCH8Q5T0T0 291 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 C1orf94Q6P1W5 598 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms