RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 IGHG1P01857 330 aa19.99■□□□□ 0.79
PTPN4-208ENST00000460289 AQP2P41181 271 aa19.99■□□□□ 0.79
PTPN4-208ENST00000460289 DAP3P51398 398 aaKnown RBP19.99■□□□□ 0.79
PTPN4-208ENST00000460289 MELKQ14680 651 aa19.99■□□□□ 0.79
PTPN4-208ENST00000460289 RAB35Q15286 201 aa19.99■□□□□ 0.79
PTPN4-208ENST00000460289 MDP1Q86V88 176 aa19.99■□□□□ 0.79
PTPN4-208ENST00000460289 CYP4Z1Q86W10 505 aa19.99■□□□□ 0.79
PTPN4-208ENST00000460289 BPIFA2Q96DR5 249 aa19.99■□□□□ 0.79
PTPN4-208ENST00000460289 SMR3AQ99954 134 aa19.99■□□□□ 0.79
PTPN4-208ENST00000460289 DENND2DQ9H6A0 471 aaPredicted RBP19.99■□□□□ 0.79
PTPN4-208ENST00000460289 B3GNT2Q9NY97 397 aa19.99■□□□□ 0.79
PTPN4-208ENST00000460289 STX18Q9P2W9 335 aaKnown RBP19.99■□□□□ 0.79
PTPN4-208ENST00000460289 VSTM5A8MXK1 200 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 CENPBD1B2RD01 187 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 MCIDASD6RGH6 385 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 SMAD7O15105 426 aaKnown RBP19.98■□□□□ 0.79
PTPN4-208ENST00000460289 DCTN3O75935 186 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 F13BP05160 661 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 TSPAN19P0C672 248 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 PGA4P0DJD7 388 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 PGA3P0DJD8 388 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 CD79AP11912 226 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 IFI30P13284 250 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 B4GALT1P15291 398 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 NCK1P16333 377 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 IDH3GP51553 393 aaPredicted RBP19.98■□□□□ 0.79
PTPN4-208ENST00000460289 CLRN1P58418 232 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 NPRL3Q12980 569 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 GSG1Q2KHT4 349 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 GLYATQ6IB77 296 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 LRFN4Q6PJG9 635 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 CLEC9AQ6UXN8 241 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 RNF113BQ8IZP6 322 aaKnown RBP19.98■□□□□ 0.79
PTPN4-208ENST00000460289 CA10Q9NS85 328 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 RHCGQ9UBD6 479 aa19.98■□□□□ 0.79
PTPN4-208ENST00000460289 GDF2Q9UK05 429 aaPredicted RBP19.98■□□□□ 0.79
PTPN4-208ENST00000460289 C2CD3Q4AC94 2353 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 ZNF503-AS2A6NEH8 195 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 H7C417 338 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 J3KTA2 159 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 NDUFS7O75251 213 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 HLA-HP01893 362 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 ACVR1BP36896 505 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 TNK1Q13470 666 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 CDK20Q8IZL9 346 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 NUP37Q8NFH4 326 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 MAN2C1Q9NTJ4 1040 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 EGFL7Q9UHF1 273 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 TAGLN3Q9UI15 199 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 SAMD4AQ9UPU9 718 aaKnown RBP19.97■□□□□ 0.79
PTPN4-208ENST00000460289 HIF3AQ9Y2N7 669 aa19.97■□□□□ 0.79
PTPN4-208ENST00000460289 FFAR1O14842 300 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 DHHO43323 396 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 PIP5K1CO60331 668 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 PDE5AO76074 875 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 UBL3O95164 117 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 CELA3BP08861 270 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 QDPRP09417 244 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 CALCRP30988 508 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 SERPINF1P36955 418 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 PRKCDQ05655 676 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 PIGFQ07326 219 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 LAPTM4AQ15012 233 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 HIST3H3Q16695 136 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 ANKDD1AQ495B1 522 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 RRM2BQ7LG56 351 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 NRMQ8IXM6 262 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 MOSPD2Q8NHP6 518 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 ACOT11Q8WXI4 607 aaPredicted RBP19.96■□□□□ 0.79
PTPN4-208ENST00000460289 FBXO17Q96EF6 278 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 MRPL13Q9BYD1 178 aaKnown RBP19.96■□□□□ 0.79
PTPN4-208ENST00000460289 SEC61A2Q9H9S3 476 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 DCAF13Q9NV06 445 aaKnown RBP19.96■□□□□ 0.79
PTPN4-208ENST00000460289 FBXL3Q9UKT7 428 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 FAM32AQ9Y421 112 aaKnown RBP19.96■□□□□ 0.79
PTPN4-208ENST00000460289 ENPP4Q9Y6X5 453 aa19.96■□□□□ 0.79
PTPN4-208ENST00000460289 NPIPB13A6NJU9 1138 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 NPIPB4C9JG80 1138 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 DYNC1I1O14576 645 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 FARS2O95363 451 aaKnown RBP19.95■□□□□ 0.78
PTPN4-208ENST00000460289 RAB36O95755 333 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 HEXAP06865 529 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 OR8G3PP0DMU2 310 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 SAGP10523 405 aaPredicted RBP19.95■□□□□ 0.78
PTPN4-208ENST00000460289 ACADSP16219 412 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 NUDT6P53370 316 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 RAB1AP62820 205 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 TAF11Q15544 211 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 SWI5Q1ZZU3 235 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 ALG10Q5BKT4 473 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 ZNF730Q6ZMV8 503 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 PGAM4Q8N0Y7 254 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 SLC22A24Q8N4F4 322 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 RNF148Q8N7C7 305 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 ANKS4BQ8N8V4 417 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 ASB10Q8WXI3 467 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 ANKRD19PQ9H560 264 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 GORASP2Q9H8Y8 452 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 NDE1Q9NXR1 346 aa19.95■□□□□ 0.78
PTPN4-208ENST00000460289 IGHV2OR16-5A0A0B4J2B6 119 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms