RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 METTL21AQ8WXB1 218 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 MRPL48Q96GC5 212 aaKnown RBP14.06□□□□□ -0.16
LMNB1-203ENST00000460265 ATF6BQ99941 703 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 EP300Q09472 2414 aaPredicted RBP14.06□□□□□ -0.16
LMNB1-203ENST00000460265 FAM221BA6H8Z2 402 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 ANXA2P2A6NMY6 339 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 S100A6P06703 90 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 FBLP22087 321 aaKnown RBP14.06□□□□□ -0.16
LMNB1-203ENST00000460265 CCR5P51681 352 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 TMEM88Q6PEY1 159 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 TSSK4Q6SA08 328 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 SLC29A4Q7RTT9 530 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 CDH26Q8IXH8 852 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 C2CD4CQ8TF44 421 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 GPR160Q9UJ42 338 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 IGHV1OR15-9A0A0B4J2B8 117 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 C4orf47A7E2U8 309 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 AIPO00170 330 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 SOX1O00570 391 aaPredicted RBP14.05□□□□□ -0.16
LMNB1-203ENST00000460265 NDUFS6O75380 124 aaKnown RBP14.05□□□□□ -0.16
LMNB1-203ENST00000460265 WNT1P04628 370 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 HAGHLQ6PII5 290 aaPredicted RBP14.05□□□□□ -0.16
LMNB1-203ENST00000460265 FIP1L1Q6UN15 594 aaKnown RBP14.05□□□□□ -0.16
LMNB1-203ENST00000460265 NPSR1Q6W5P4 371 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 RFLNBQ8N5W9 214 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 C5orf34Q96MH7 638 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 TCF7L1Q9HCS4 588 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 COA4Q9NYJ1 87 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 CTSFQ9UBX1 484 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 TMEM184BQ9Y519 407 aaPredicted RBP14.05□□□□□ -0.16
LMNB1-203ENST00000460265 TICRRQ7Z2Z1 1910 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 E9PQ18 207 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 TGFBR3LH3BV60 316 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 BHLHE40O14503 412 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 NSA2O95478 260 aaKnown RBP14.05□□□□□ -0.16
LMNB1-203ENST00000460265 TFP02787 698 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 NGFRP08138 427 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 FGL1Q08830 312 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 SQSTM1Q13501 440 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 CEBPEQ15744 281 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 TMEM91Q6ZNR0 172 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 SSX6Q7RTT6 188 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 LAMP5Q9UJQ1 280 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 SHISA3A0PJX4 238 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 ABCD4O14678 606 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 ZNF264O43296 627 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 MAS1P04201 325 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 CFIP05156 583 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 RAB13P51153 203 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 SERTAD2Q14140 314 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 GAS6Q14393 721 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 SLC25A35Q3KQZ1 300 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 SYT13Q7L8C5 426 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 NKX6-2Q9C056 277 aaPredicted RBP14.05□□□□□ -0.16
LMNB1-203ENST00000460265 SLITRK2Q9H156 845 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 EVA1AQ9H8M9 152 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 RXFP3Q9NSD7 469 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 VDAC3Q9Y277 283 aa14.05□□□□□ -0.16
LMNB1-203ENST00000460265 CNOT1A5YKK6 2376 aaKnown RBP14.04□□□□□ -0.16
LMNB1-203ENST00000460265 PRR19A6NJB7 356 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 SLC19A2O60779 497 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 UTS2O95399 124 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 EIF1AXP47813 144 aaKnown RBP14.04□□□□□ -0.16
LMNB1-203ENST00000460265 FNTBP49356 437 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 SELENOPP49908 381 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 MC2RQ01718 297 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 TMPRSS11FQ6ZWK6 438 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 TSEN15Q8WW01 171 aaKnown RBP14.04□□□□□ -0.16
LMNB1-203ENST00000460265 NSMAFQ92636 917 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 MED18Q9BUE0 208 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 BCL2L14Q9BZR8 327 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 FGF21Q9NSA1 209 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 SLC6A5Q9Y345 797 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 TLCD2A6NGC4 264 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 DUX1O43812 170 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 ARL6IP5O75915 188 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 CT45A8P0DMV1 189 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 CT45A9P0DMV2 189 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 SRFP11831 508 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 PVALBP20472 110 aaPredicted RBP14.04□□□□□ -0.16
LMNB1-203ENST00000460265 FXYD6P3P58550 94 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 MGAT2Q10469 447 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 TSC22D1Q15714 1073 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 CD226Q15762 336 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 PAN3Q58A45 887 aaKnown RBP14.04□□□□□ -0.16
LMNB1-203ENST00000460265 CT45A2Q5DJT8 189 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 FHL5Q5TD97 284 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 SLC35D2Q76EJ3 337 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 PRSS45Q7RTY3 260 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 DUSP19Q8WTR2 217 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 WBP1Q96G27 269 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 VSTM2LQ96N03 204 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 SOSTQ9BQB4 213 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 PHF7Q9BWX1 381 aaPredicted RBP14.04□□□□□ -0.16
LMNB1-203ENST00000460265 DNTTIP1Q9H147 329 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 PTPRZ1P23471 2315 aaPredicted RBP14.04□□□□□ -0.16
LMNB1-203ENST00000460265 SPTBN2O15020 2390 aa14.04□□□□□ -0.16
LMNB1-203ENST00000460265 RP2O75695 350 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 GPANK1O95872 356 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 RLN2P04090 185 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms