RNA–Protein interactions for RNA: ENST00000459850.5

ABCA2-208, Transcript of ATP binding cassette subfamily A member 2, human

TSL 1 (best)

Gene ABCA2, Length 8,073 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-208	ENST00000459850	FAM103A1	Q9BTL3	118 aa	Known RBP	11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	ASB4	Q9Y574	426 aa		11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850		I6L893	689 aa	Predicted RBP	11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	GALR3	O60755	368 aa	Predicted RBP	11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	EGF	P01133	1207 aa		11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	F13B	P05160	661 aa		11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	UBB	P0CG47	229 aa		11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	TAGLN2	P37802	199 aa	Known RBP	11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	LGALS12	Q96DT0	336 aa		11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	ASIC5	Q9NY37	505 aa		11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	PMP2	P02689	132 aa		11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	RHOB	P62745	196 aa		11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	PGAP1	Q75T13	922 aa		11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	SIAH1	Q8IUQ4	282 aa		11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	OR52B6	Q8NGF0	335 aa		11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	ZNF582	Q96NG8	517 aa	Predicted RBP	11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	SPO11	Q9Y5K1	396 aa		11.21	□□□□□ -0.62
ABCA2-208	ENST00000459850	NUDT1	P36639	197 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	RBM12B	Q8IXT5	1001 aa	Known RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	SPHK1	Q9NYA1	384 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	CLEC1B	Q9P126	229 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	METTL15	A6NJ78	407 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	IL2RA	P01589	272 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	WNT4	P56705	351 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	RPS27A	P62979	156 aa	Known RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	UBA52	P62987	128 aa	Known RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	DEFB109B	Q30KR1	87 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	GLYR1	Q49A26	553 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	GFRAL	Q6UXV0	394 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	APOOL	Q6UXV4	268 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	SLC12A9	Q9BXP2	914 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	AMBRA1	Q9C0C7	1298 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	FER1L5	A0AVI2	2057 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	ALS2	Q96Q42	1657 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850		A0A0B4J2A0	478 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	CPE	P16870	476 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	MNX1	P50219	401 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	OR10A3	P58181	314 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	METAP1D	Q6UB28	335 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	MRPS24	Q96EL2	167 aa	Known RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	APIP	Q96GX9	242 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	INPP5K	Q9BT40	448 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	SHPK	Q9UHJ6	478 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	EIF3F	O00303	357 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	AQP9	O43315	295 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	CIDEA	O60543	219 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	SLC5A2	P31639	672 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	ENDOV	Q8N8Q3	282 aa	Known RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	RTP4	Q96DX8	246 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	DEFB127	Q9H1M4	99 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	WASH6P	Q9NQA3	447 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	ANTXRL	A6NF34	631 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	PRAMEF25	A6NGN4	478 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	OR7C2	O60412	319 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	HSF1	Q00613	529 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	SYT6	Q5T7P8	510 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	PRAMEF5	Q5TYX0	476 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	PRAMEF6	Q5VXH4	476 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	DPPA2	Q7Z7J5	298 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	TMEM135	Q86UB9	458 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	SCML4	Q8N228	414 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	PADI1	Q9ULC6	663 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	BRWD1	Q9NSI6	2320 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	ZNF593	O00488	134 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	YKT6	O15498	198 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	LTB4R	Q15722	352 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	CCDC71	Q8IV32	467 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	CDH26	Q8IXH8	852 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	FBXL14	Q8N1E6	418 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	FUBP1	Q96AE4	644 aa	Known RBP	11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	ZNF583	Q96ND8	569 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	RAB6C	Q9H0N0	254 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	ZCCHC4	Q9H5U6	513 aa		11.2	□□□□□ -0.62
ABCA2-208	ENST00000459850	FAM166B	A8MTA8	275 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	OR5H8	P0DN80	308 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	OSM	P13725	252 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	M6PR	P20645	277 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	MAT1A	Q00266	395 aa	Known RBP	11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	LRRC28	Q86X40	367 aa	Predicted RBP	11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	FRMD1	Q8N878	549 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	OR13C5	Q8NGS8	318 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	OR13C2	Q8NGS9	318 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	LMO3	Q8TAP4	145 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	MOCOS	Q96EN8	888 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	FEV	Q99581	238 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	EDEM2	Q9BV94	578 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	GDE1	Q9NZC3	331 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	RFPL3	O75679	317 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	GPR32P1	Q8NGA4	272 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	LILRB1	Q8NHL6	650 aa	Predicted RBP	11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	DUSP19	Q8WTR2	217 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	SMAP2	Q8WU79	429 aa	Predicted RBP	11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	ZNF764	Q96H86	408 aa	Predicted RBP	11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	IGSF5	Q9NSI5	407 aa		11.19	□□□□□ -0.62
ABCA2-208	ENST00000459850	GAR1	Q9NY12	217 aa	Known RBP	11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms