RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 TNFRSF13CQ96RJ3 184 aa14.13□□□□□ -0.15
CD28-203ENST00000458610 CCL19Q99731 98 aa14.13□□□□□ -0.15
CD28-203ENST00000458610 TXNIPQ9H3M7 391 aa14.13□□□□□ -0.15
CD28-203ENST00000458610 DENND2DQ9H6A0 471 aaPredicted RBP14.13□□□□□ -0.15
CD28-203ENST00000458610 MAGIXQ9H6Y5 334 aa14.13□□□□□ -0.15
CD28-203ENST00000458610 NPAP1Q9NZP6 1156 aa14.13□□□□□ -0.15
CD28-203ENST00000458610 POU2F3Q9UKI9 436 aa14.13□□□□□ -0.15
CD28-203ENST00000458610 SPG11Q96JI7 2443 aa14.13□□□□□ -0.15
CD28-203ENST00000458610 A6NIZ1 184 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 SMPD2O60906 423 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 FARS2O95363 451 aaKnown RBP14.12□□□□□ -0.15
CD28-203ENST00000458610 CBR1P16152 277 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 ARR3P36575 388 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 RPL4P36578 427 aaKnown RBP14.12□□□□□ -0.15
CD28-203ENST00000458610 CAPZA2P47755 286 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 ZNF84P51523 738 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 CTXN1P60606 82 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 RAP1BP61224 184 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 RPS4XP62701 263 aaKnown RBP14.12□□□□□ -0.15
CD28-203ENST00000458610 RAP1AP62834 184 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 MELKQ14680 651 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 ZNF672Q499Z4 452 aaPredicted RBP14.12□□□□□ -0.15
CD28-203ENST00000458610 ZBED5Q49AG3 693 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 PHYHD1Q5SRE7 291 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 ZNF813Q6ZN06 617 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 DPPA2Q7Z7J5 298 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 LINC00471Q8N535 108 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 IL17RDQ8NFM7 739 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 OR4K5Q8NGD3 323 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 OR52J3Q8NH60 311 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 TMEM171Q8WVE6 324 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 ASB10Q8WXI3 467 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 RBP7Q96R05 134 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 SEPHS2Q99611 448 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 FOXB1Q99853 325 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 BTBD10Q9BSF8 475 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 CXorf56Q9H5V9 222 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 CISD1Q9NZ45 108 aaKnown RBP14.12□□□□□ -0.15
CD28-203ENST00000458610 FBXL3Q9UKT7 428 aa14.12□□□□□ -0.15
CD28-203ENST00000458610 ARHGEF9O43307 516 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 DHHO43323 396 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 PDE5AO76074 875 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 DIRAS1O95057 198 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 CRYAAP02489 173 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 QDPRP09417 244 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 PGA4P0DJD7 388 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 PGA3P0DJD8 388 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 RPL27P61353 136 aaKnown RBP14.11□□□□□ -0.15
CD28-203ENST00000458610 LSM11P83369 360 aaKnown RBP eCLIP14.11□□□□□ -0.15
CD28-203ENST00000458610 IQCCQ4KMZ1 466 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 ARMC4Q5T2S8 1044 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 SPNS3Q6ZMD2 512 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 LRRC75A-AS1Q8N1F1 130 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 SMAP2Q8WU79 429 aaPredicted RBP14.11□□□□□ -0.15
CD28-203ENST00000458610 ZNF837Q96EG3 531 aaPredicted RBP14.11□□□□□ -0.15
CD28-203ENST00000458610 SLC38A2Q96QD8 506 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 ALG12Q9BV10 488 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 MRPL13Q9BYD1 178 aaKnown RBP14.11□□□□□ -0.15
CD28-203ENST00000458610 CXXC4Q9H2H0 198 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 SMURF2Q9HAU4 748 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 CRNNQ9UBG3 495 aaPredicted RBP14.11□□□□□ -0.15
CD28-203ENST00000458610 GRHPRQ9UBQ7 328 aa14.11□□□□□ -0.15
CD28-203ENST00000458610 ZNF346Q9UL40 294 aaKnown RBP14.11□□□□□ -0.15
CD28-203ENST00000458610 FBN2P35556 2912 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 TRAV27A0A087WT01 109 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 TRBV4-1A0A0J9YWV2 114 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 SH3PXD2BA1X283 911 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 AQP12BA6NM10 295 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 VSTM5A8MXK1 200 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 SHISA9B4DS77 424 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 TRMUO75648 421 aaKnown RBP14.1□□□□□ -0.15
CD28-203ENST00000458610 DNAJC8O75937 253 aaPredicted RBP14.1□□□□□ -0.15
CD28-203ENST00000458610 UBL3O95164 117 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 NDUFB2O95178 105 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 IGHMP01871 453 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 OR8G3PP0DMU2 310 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 ATP6V1B2P21281 511 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 FUT4P22083 530 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 RRM2P31350 389 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 GUCA1AP43080 201 aaPredicted RBP14.1□□□□□ -0.15
CD28-203ENST00000458610 GPR4P46093 362 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 CDH11P55287 796 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 MS4A2Q01362 244 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 HIST3H3Q16695 136 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 NRN1LQ496H8 165 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 THEM4Q5T1C6 240 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 LRFN4Q6PJG9 635 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 AQP12AQ8IXF9 295 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 NOXO1Q8NFA2 376 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 KBTBD8Q8NFY9 601 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 OR13C2Q8NGS9 318 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 LILRB1Q8NHL6 650 aaPredicted RBP14.1□□□□□ -0.15
CD28-203ENST00000458610 MCHR2Q969V1 340 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 FAM46AQ96IP4 442 aaKnown RBP14.1□□□□□ -0.15
CD28-203ENST00000458610 KATNB1Q9BVA0 655 aa14.1□□□□□ -0.15
CD28-203ENST00000458610 NBPF19A0A087WUL8 3843 aa14.09□□□□□ -0.15
CD28-203ENST00000458610 UNC119BA6NIH7 251 aa14.09□□□□□ -0.15
CD28-203ENST00000458610 XKRYO14609 159 aa14.09□□□□□ -0.15
CD28-203ENST00000458610 AHCYL1O43865 530 aa14.09□□□□□ -0.15
CD28-203ENST00000458610 OR10H3O60404 316 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms