RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ADAMTS16Q8TE57 1224 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 HIST1H2ACQ93077 130 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 TAMM41Q96BW9 452 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 MS4A3Q96HJ5 214 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 FOXN4Q96NZ1 517 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 PLA2G12AQ9BZM1 189 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 ZNF385DQ9H6B1 395 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 KAT8Q9H7Z6 458 aaKnown RBP13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 NANSQ9NR45 359 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 TMEM160Q9NX00 188 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 CMAHPQ9Y471 501 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 SPEF1Q9Y4P9 236 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 MALRD1Q5VYJ5 2156 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 IGHV4-61A0A0C4DH41 118 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 LOC100289279A0A1B0GTE1 492 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 TRAPPC13A5PLN9 417 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 VWC2LB2RUY7 222 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 UBL3O95164 117 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 DAOP14920 347 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 GIPRP48546 466 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 MELKQ14680 651 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 ZNF74Q16587 644 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 MMEL1Q495T6 779 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 CGB2Q6NT52 195 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 SLC35D2Q76EJ3 337 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 NANOGNBQ7Z5D8 188 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 CDK20Q8IZL9 346 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 TSPEARQ8WU66 669 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 RASSF5Q8WWW0 418 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 C1orf159Q96HA4 380 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 TMEM120AQ9BXJ8 343 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 BPESC1Q9GZL8 116 aa13.61□□□□□ -0.23
CHCHD3-204ENST00000457942 ADRA2AP08913 450 aa13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 RAB1AP62820 205 aa13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 CYLC2Q14093 348 aaPredicted RBP13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 VMACQ2NL98 169 aa13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 WDR88Q6ZMY6 472 aa13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 WDFY1Q8IWB7 410 aa13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 ZCCHC24Q8N2G6 241 aaKnown RBP13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 OR4D11Q8NGI4 311 aa13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 NEU4Q8WWR8 484 aaPredicted RBP13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 ZNF566Q969W8 418 aa13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 MPP4Q96JB8 637 aa13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 SH3GL1Q99961 368 aa13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 TPK1Q9H3S4 243 aa13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 B3GNT2Q9NY97 397 aa13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 ZNF229Q9UJW7 825 aa13.6□□□□□ -0.23
CHCHD3-204ENST00000457942 MCIDASD6RGH6 385 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 ENTPD5O75356 428 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 TROVE2P10155 538 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 HNF1AP20823 631 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 TAS2R41P59536 307 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 RPS23P62266 143 aaKnown RBP13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 LINC00114Q6XXX2 140 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 DEF8Q6ZN54 512 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 OR6X1Q8NH79 312 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 DOK1Q99704 481 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 ECSITQ9BQ95 431 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 SYT3Q9BQG1 590 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 GLTPQ9NZD2 209 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 FBXL3Q9UKT7 428 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 SH3GLB1Q9Y371 365 aa13.59□□□□□ -0.23
CHCHD3-204ENST00000457942 BLOC1S5-TXNDC5H3BN57 136 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 M0R233 179 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 KCNAB3O43448 404 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 ATP8B1O43520 1251 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 SPRY1O43609 319 aaPredicted RBP13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 FARS2O95363 451 aaKnown RBP13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 STAMBPO95630 424 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 TGFAP01135 160 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 THY1P04216 161 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 ZNF14P17017 642 aaPredicted RBP13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 ZNF23P17027 643 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 NR4A1P22736 598 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 MDH1P40925 334 aaKnown RBP13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 CLRN1P58418 232 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 RAB39AQ14964 217 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 RABL3Q5HYI8 236 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 METTL21CQ5VZV1 264 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 NANOGP8Q6NSW7 305 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 ZNF627Q7L945 461 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 CARM1Q86X55 608 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 LRRC17Q8N6Y2 441 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 UBASH3BQ8TF42 649 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 TMEM54Q969K7 222 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 MRPL24Q96A35 216 aaKnown RBP13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 MSI2Q96DH6 328 aaKnown RBP13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 MRPL37Q9BZE1 423 aaKnown RBP13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 SLC19A3Q9BZV2 496 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 DENND2DQ9H6A0 471 aaPredicted RBP13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 RNF121Q9H920 327 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 NANOGQ9H9S0 305 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 BAG5Q9UL15 447 aa13.58□□□□□ -0.24
CHCHD3-204ENST00000457942 A0A1W2PRG6 482 aa13.57□□□□□ -0.24
CHCHD3-204ENST00000457942 LRP5LA4QPB2 252 aa13.57□□□□□ -0.24
CHCHD3-204ENST00000457942 FBP2O00757 339 aa13.57□□□□□ -0.24
CHCHD3-204ENST00000457942 MRASO14807 208 aa13.57□□□□□ -0.24
CHCHD3-204ENST00000457942 LYPD3O95274 346 aa13.57□□□□□ -0.24
CHCHD3-204ENST00000457942 BCL10O95999 233 aa13.57□□□□□ -0.24
CHCHD3-204ENST00000457942 IGHG1P01857 330 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms