RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 GUCD1Q96NT3 240 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 NUDT22Q9BRQ3 303 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 OR8D2Q9GZM6 311 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 DNAJB12Q9NXW2 375 aaKnown RBP11.28□□□□□ -0.6
LINC00959-201ENST00000456581 OR5V1Q9UGF6 321 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 SCP2D1Q9UJQ7 156 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 ATXN7L1Q9ULK2 861 aaPredicted RBP11.28□□□□□ -0.6
LINC00959-201ENST00000456581 MRPS33Q9Y291 106 aaKnown RBP11.28□□□□□ -0.6
LINC00959-201ENST00000456581 IFITM5A6NNB3 132 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 C17orf105B2RV13 164 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 DCTN6O00399 190 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 OGG1O15527 345 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 CLPSP04118 112 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 MAS1P04201 325 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 LPLP06858 475 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 ADRA2CP18825 462 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 CDK2P24941 298 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 PTH2RP49190 550 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 GUCA2AQ02747 115 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 OPCMLQ14982 345 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 UBE2NLQ5JXB2 153 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 ZNF595Q8IYB9 648 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 OR5M1Q8NGP8 315 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 NOX3Q9HBY0 568 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 C12orf4Q9NQ89 552 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 INPP5EQ9NRR6 644 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 CUTCQ9NTM9 273 aa11.27□□□□□ -0.6
LINC00959-201ENST00000456581 TRAV1-2A0A0B4J238 106 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 TMEM72A0PK05 275 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 ATP6V1G2-DDX39BF2Z307 99 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 H3BMH7 237 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 AK1P00568 194 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 PSMB1P20618 241 aaKnown RBP11.27□□□□□ -0.61
LINC00959-201ENST00000456581 DPP4P27487 766 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 SLC6A6P31641 620 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 AFF3P51826 1226 aaKnown RBP11.27□□□□□ -0.61
LINC00959-201ENST00000456581 TAS2R43P59537 309 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 BCORP1Q8N888 145 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 BOLLQ8N9W6 283 aaKnown RBP11.27□□□□□ -0.61
LINC00959-201ENST00000456581 ZSCAN1Q8NBB4 408 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 RBPMSQ93062 196 aaKnown RBP11.27□□□□□ -0.61
LINC00959-201ENST00000456581 SHDQ96IW2 340 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 LMF2Q9BU23 707 aaKnown RBP11.27□□□□□ -0.61
LINC00959-201ENST00000456581 LANCL2Q9NS86 450 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 ABRACLQ9P1F3 81 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 ZNF749O43361 778 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 OIP5O43482 229 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 DOK2O60496 412 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 F13BP05160 661 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 SPI1P17947 270 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 P2RX1P51575 399 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 IGLV3-21P80748 117 aaPredicted RBP11.27□□□□□ -0.61
LINC00959-201ENST00000456581 PITPNAQ00169 270 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 ZP2Q05996 745 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 TMEM69Q5SWH9 247 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 DCAF12L2Q5VW00 463 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 ZNF615Q8N8J6 731 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 NPEPL1Q8NDH3 523 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 TOR1AIP2Q8NFQ8 470 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 FAM174AQ8TBP5 190 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 PTPMT1Q8WUK0 201 aaPredicted RBP11.27□□□□□ -0.61
LINC00959-201ENST00000456581 HOXB13Q92826 284 aaPredicted RBP11.27□□□□□ -0.61
LINC00959-201ENST00000456581 ZDHHC12Q96GR4 267 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 SIT1Q9Y3P8 196 aa11.27□□□□□ -0.61
LINC00959-201ENST00000456581 KHNYNO15037 678 aaKnown RBP11.26□□□□□ -0.61
LINC00959-201ENST00000456581 ARPC5O15511 151 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 ARL6IP5O75915 188 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 IGF2P01344 180 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 IFNA7P01567 189 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 VSIG10L2P0DP72 767 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 CDKN2AP42771 156 aaKnown RBP11.26□□□□□ -0.61
LINC00959-201ENST00000456581 ARL4DP49703 201 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 EFNB2P52799 333 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 PON3Q15166 354 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 SHBQ15464 509 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 CLLU1Q5K131 121 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 ARHGAP11AQ6P4F7 1023 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 SEZ6L2Q6UXD5 910 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 CFAP77Q6ZQR2 320 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 RELL2Q8NC24 303 aaPredicted RBP11.26□□□□□ -0.61
LINC00959-201ENST00000456581 ELF4Q99607 663 aaPredicted RBP11.26□□□□□ -0.61
LINC00959-201ENST00000456581 GSX2Q9BZM3 304 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 CHST6Q9GZX3 395 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 UCK1Q9HA47 277 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 SRA1Q9HD15 236 aaKnown RBP11.26□□□□□ -0.61
LINC00959-201ENST00000456581 FKBP7Q9Y680 259 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 TRAV8-7A0A075B6U6 113 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 M6PRP20645 277 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 AQP2P41181 271 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 H2BFSP57053 126 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 SKP1P63208 163 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 ACTC1P68032 377 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 ACTA1P68133 377 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 FUT7Q11130 342 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 GRM7Q14831 915 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 SLC22A10Q63ZE4 541 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 LEG1Q6P5S2 330 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 MAMSTRQ6ZN01 415 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 LRRC69Q6ZNQ3 347 aa11.26□□□□□ -0.61
LINC00959-201ENST00000456581 PRSS42Q7Z5A4 293 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms