RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 B3GAT2Q9NPZ5 323 aa18.75■□□□□ 0.59
SEC22C-213ENST00000456222 ADRA2AP08913 450 aa18.74■□□□□ 0.59
SEC22C-213ENST00000456222 ZNF23P17027 643 aa18.74■□□□□ 0.59
SEC22C-213ENST00000456222 TNFRSF1BP20333 461 aa18.74■□□□□ 0.59
SEC22C-213ENST00000456222 SRSF2Q01130 221 aaKnown RBP18.74■□□□□ 0.59
SEC22C-213ENST00000456222 IQCCQ4KMZ1 466 aa18.74■□□□□ 0.59
SEC22C-213ENST00000456222 LRFN4Q6PJG9 635 aa18.74■□□□□ 0.59
SEC22C-213ENST00000456222 SLC35D2Q76EJ3 337 aa18.74■□□□□ 0.59
SEC22C-213ENST00000456222 ZNF584Q8IVC4 421 aa18.74■□□□□ 0.59
SEC22C-213ENST00000456222 SKA3Q8IX90 412 aa18.74■□□□□ 0.59
SEC22C-213ENST00000456222 IL17RDQ8NFM7 739 aa18.74■□□□□ 0.59
SEC22C-213ENST00000456222 REPIN1Q9BWE0 567 aaKnown RBP18.74■□□□□ 0.59
SEC22C-213ENST00000456222 SHARPINQ9H0F6 387 aa18.74■□□□□ 0.59
SEC22C-213ENST00000456222 DYNLRB1Q9NP97 96 aa18.74■□□□□ 0.59
SEC22C-213ENST00000456222 MEPEQ9NQ76 525 aaPredicted RBP18.74■□□□□ 0.59
SEC22C-213ENST00000456222 TRIM33Q9UPN9 1127 aa18.74■□□□□ 0.59
SEC22C-213ENST00000456222 TRAPPC13A5PLN9 417 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 FXYD1O00168 92 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 GIFP27352 417 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 RAB1AP62820 205 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 RAB39AQ14964 217 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 VMACQ2NL98 169 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 RABL3Q5HYI8 236 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 FAM166AQ6J272 317 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 NANOGP8Q6NSW7 305 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 PATL1Q86TB9 770 aaKnown RBP18.73■□□□□ 0.59
SEC22C-213ENST00000456222 LRP11Q86VZ4 500 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 OR6X1Q8NH79 312 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 TSPEARQ8WU66 669 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 PCDHAC1Q9H158 963 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 NANOGQ9H9S0 305 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 GLTPQ9NZD2 209 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 MYEF2Q9P2K5 600 aaKnown RBP18.73■□□□□ 0.59
SEC22C-213ENST00000456222 FZR1Q9UM11 496 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 CMAHPQ9Y471 501 aa18.73■□□□□ 0.59
SEC22C-213ENST00000456222 LILRA1O75019 489 aa18.72■□□□□ 0.59
SEC22C-213ENST00000456222 SASH3O75995 380 aa18.72■□□□□ 0.59
SEC22C-213ENST00000456222 OR6A2O95222 327 aa18.72■□□□□ 0.59
SEC22C-213ENST00000456222 ASAH2BP0C7U1 165 aa18.72■□□□□ 0.59
SEC22C-213ENST00000456222 RUNX1T1Q06455 604 aa18.72■□□□□ 0.59
SEC22C-213ENST00000456222 ZP4Q12836 540 aa18.72■□□□□ 0.59
SEC22C-213ENST00000456222 SF3A3Q12874 501 aaKnown RBP eCLIP18.72■□□□□ 0.59
SEC22C-213ENST00000456222 TRIP10Q15642 601 aa18.72■□□□□ 0.59
SEC22C-213ENST00000456222 FAM120AOSQ5T036 256 aa18.72■□□□□ 0.59
SEC22C-213ENST00000456222 TTC33Q6PID6 262 aaPredicted RBP18.72■□□□□ 0.59
SEC22C-213ENST00000456222 HDXQ7Z353 690 aa18.72■□□□□ 0.59
SEC22C-213ENST00000456222 NEU4Q8WWR8 484 aaPredicted RBP18.72■□□□□ 0.59
SEC22C-213ENST00000456222 MRPL24Q96A35 216 aaKnown RBP18.72■□□□□ 0.59
SEC22C-213ENST00000456222 SYT3Q9BQG1 590 aa18.72■□□□□ 0.59
SEC22C-213ENST00000456222 NANSQ9NR45 359 aa18.72■□□□□ 0.59
SEC22C-213ENST00000456222 KCNS2Q9ULS6 477 aa18.72■□□□□ 0.59
SEC22C-213ENST00000456222 RNF13O43567 381 aa18.71■□□□□ 0.59
SEC22C-213ENST00000456222 SHOX2O60902 331 aaPredicted RBP18.71■□□□□ 0.59
SEC22C-213ENST00000456222 H2AFXP16104 143 aaPredicted RBP18.71■□□□□ 0.59
SEC22C-213ENST00000456222 MAD2L1BPQ15013 274 aaPredicted RBP18.71■□□□□ 0.59
SEC22C-213ENST00000456222 FXNQ16595 210 aa18.71■□□□□ 0.59
SEC22C-213ENST00000456222 TRMT5Q32P41 509 aaKnown RBP18.71■□□□□ 0.59
SEC22C-213ENST00000456222 CCDC80Q76M96 950 aa18.71■□□□□ 0.59
SEC22C-213ENST00000456222 CALHM3Q86XJ0 350 aa18.71■□□□□ 0.59
SEC22C-213ENST00000456222 ZNF786Q8N393 782 aa18.71■□□□□ 0.59
SEC22C-213ENST00000456222 SH3GL3Q99963 347 aa18.71■□□□□ 0.59
SEC22C-213ENST00000456222 TMEM120AQ9BXJ8 343 aa18.71■□□□□ 0.59
SEC22C-213ENST00000456222 LPAR3Q9UBY5 353 aa18.71■□□□□ 0.59
SEC22C-213ENST00000456222 VSTM5A8MXK1 200 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 TGFAP01135 160 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 TACSTD2P09758 323 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 PGA4P0DJD7 388 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 PGA3P0DJD8 388 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 TCN1P20061 433 aaPredicted RBP18.7■□□□□ 0.58
SEC22C-213ENST00000456222 ALDH3B1P43353 468 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 SEC24CP53992 1094 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 ANK2Q01484 3957 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 RIN1Q13671 783 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 KRTAP24-1Q3LI83 254 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 CARM1Q86X55 608 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 NKAIN4Q8IVV8 208 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 SLC30A8Q8IWU4 369 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 SLC22A24Q8N4F4 322 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 PAQR4Q8N4S7 273 aaPredicted RBP18.7■□□□□ 0.58
SEC22C-213ENST00000456222 PFN4Q8NHR9 129 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 SLC26A7Q8TE54 656 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 UBASH3BQ8TF42 649 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 TMEM158Q8WZ71 300 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 ZNF566Q969W8 418 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 SLC25A44Q96H78 314 aaPredicted RBP18.7■□□□□ 0.58
SEC22C-213ENST00000456222 SNX18Q96RF0 628 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 VIPAS39Q9H9C1 493 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 TMEM38BQ9NVV0 291 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 ZNF229Q9UJW7 825 aa18.7■□□□□ 0.58
SEC22C-213ENST00000456222 SYNGR3O43761 229 aa18.69■□□□□ 0.58
SEC22C-213ENST00000456222 UBL3O95164 117 aa18.69■□□□□ 0.58
SEC22C-213ENST00000456222 RAB36O95755 333 aa18.69■□□□□ 0.58
SEC22C-213ENST00000456222 GLRXP35754 106 aa18.69■□□□□ 0.58
SEC22C-213ENST00000456222 UGT2B15P54855 530 aa18.69■□□□□ 0.58
SEC22C-213ENST00000456222 ELFN2Q5R3F8 820 aa18.69■□□□□ 0.58
SEC22C-213ENST00000456222 METTL21CQ5VZV1 264 aa18.69■□□□□ 0.58
SEC22C-213ENST00000456222 PIWIL3Q7Z3Z3 882 aaKnown RBP18.69■□□□□ 0.58
SEC22C-213ENST00000456222 ZNF540Q8NDQ6 660 aa18.69■□□□□ 0.58
SEC22C-213ENST00000456222 LRRC58Q96CX6 371 aa18.69■□□□□ 0.58
SEC22C-213ENST00000456222 MPP4Q96JB8 637 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms