RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 C1orf162Q8NEQ5 155 aaPredicted RBP12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 STEAP2Q8NFT2 490 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 OR2T33Q8NG76 320 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 TEX47Q8TBZ9 253 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 TMEM54Q969K7 222 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 TSPAN32Q96QS1 320 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 SNX18Q96RF0 628 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 EMC6Q9BV81 110 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 TEX12Q9BXU0 123 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 SMURF2Q9HAU4 748 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 TBC1D23Q9NUY8 699 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 TAS2R16Q9NYV7 291 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 USE1Q9NZ43 259 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 GLTPQ9NZD2 209 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 REV1Q9UBZ9 1251 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 PRSS50Q9UI38 385 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ZNF346Q9UL40 294 aaKnown RBP12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 MAGED1Q9Y5V3 778 aaPredicted RBP12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 MED12LQ86YW9 2145 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 MPDZO75970 2070 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 H3BN98 237 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 MGRN1O60291 552 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 UPK3AO75631 287 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 TRMUO75648 421 aaKnown RBP12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 TP53P04637 393 aaPredicted RBP12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ANPEPP15144 967 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 PAX7P23759 505 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 EDNRAP25101 427 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 NOS3P29474 1203 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 UGT2B10P36537 528 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 DAPP51397 102 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ZNF133P52736 654 aaPredicted RBP12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 CLRN1P58418 232 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ESRRGP62508 458 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 FAPQ12884 760 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 CAMK2DQ13557 499 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 RCN1Q15293 331 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 THEM4Q5T1C6 240 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 OR7E24Q6IFN5 339 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 STAC2Q6ZMT1 411 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 IGFN1Q86VF2 1251 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 P2RY8Q86VZ1 359 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ACBD4Q8NC06 268 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 NOXO1Q8NFA2 376 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 MAGEE2Q8TD90 523 aaPredicted RBP12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 KISS1RQ969F8 398 aaPredicted RBP12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ZNF570Q96NI8 536 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ERMAPQ96PL5 475 aaPredicted RBP12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 RBP7Q96R05 134 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 KCNK17Q96T54 332 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 TSSK6Q9BXA6 273 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ENKD1Q9H0I2 346 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 EGLN3Q9H6Z9 239 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 KRT84Q9NSB2 600 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ADAM18Q9Y3Q7 739 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 IER3IP1Q9Y5U9 82 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 INTS1Q8N201 2190 aaKnown RBP12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 KIAA1549Q9HCM3 1950 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 SAC3D1A6NKF1 404 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 BHLHE40O14503 412 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 IGHV3-9P01782 118 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 HOXB1P14653 301 aaPredicted RBP12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 IGFBP2P18065 325 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 CDH2P19022 906 aaPredicted RBP12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 IGFBP5P24593 272 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 GIPRP48546 466 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 ALDH3A2P51648 485 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 TOP3AQ13472 1001 aaPredicted RBP12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 KRR1Q13601 381 aaKnown RBP12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 DAG1Q14118 895 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 MELKQ14680 651 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 SLC36A3Q495N2 470 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 NRN1LQ496H8 165 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 SLC27A4Q6P1M0 643 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 CXorf67Q86X51 503 aaPredicted RBP12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 C17orf78Q8N4C9 275 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 EME1Q96AY2 570 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 NMD3Q96D46 503 aaKnown RBP12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 Q96M85 177 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 MUS81Q96NY9 551 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 PSMG3-AS1Q96PY0 264 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 SPOCK3Q9BQ16 436 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 PLA2G12AQ9BZM1 189 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 ULBP2Q9BZM5 246 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 GPR35Q9HC97 309 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 NPDC1Q9NQX5 325 aaPredicted RBP12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 VSX1Q9NZR4 365 aaPredicted RBP12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 IL20RAQ9UHF4 553 aa12.61□□□□□ -0.39
HMGXB4-204ENST00000455359 ARHGAP21Q5T5U3 1957 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 TEX13CA0A0J9YWL9 993 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 PRSS37A4D1T9 235 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 M0R3G1 203 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 ARHGEF9O43307 516 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 SOX14O95416 240 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 PPP1R3DO95685 299 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 IFNGP01579 166 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 HMGN1P05114 100 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 ALPLP05186 524 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 IGHV1-2P23083 117 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 IL32P24001 234 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms