RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 IMPAD1Q9NX62 359 aa14.71□□□□□ -0.05
CCDC90B-202ENST00000455220 ZNF226Q9NYT6 803 aa14.71□□□□□ -0.05
CCDC90B-202ENST00000455220 VSX1Q9NZR4 365 aaPredicted RBP14.71□□□□□ -0.05
CCDC90B-202ENST00000455220 RALYQ9UKM9 306 aaKnown RBP14.71□□□□□ -0.05
CCDC90B-202ENST00000455220 LRRC42Q9Y546 428 aa14.71□□□□□ -0.05
CCDC90B-202ENST00000455220 INTS1Q8N201 2190 aaKnown RBP14.71□□□□□ -0.06
CCDC90B-202ENST00000455220 PRSS37A4D1T9 235 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 ZNF726A6NNF4 738 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 M0R129 80 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 ARHGEF9O43307 516 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 IL2RAP01589 272 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 IGHG1P01857 330 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 ZNF3P17036 446 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 GABRB1P18505 474 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 ISL1P61371 349 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 SNRPGP62308 76 aaKnown RBP14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 CAMK2DQ13557 499 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 CRMP1Q14194 572 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 HIST3H3Q16695 136 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 RIPPLY2Q5TAB7 128 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 NIPAL3Q6P499 406 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 ENTHD1Q8IYW4 607 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 GCNT2Q8N0V5 402 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 TCEANCQ8N8B7 351 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 NOXO1Q8NFA2 376 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 TMEM163Q8TC26 289 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 ZNF566Q969W8 418 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 INTS12Q96CB8 462 aaKnown RBP14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 NMD3Q96D46 503 aaKnown RBP14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 PLEKHA8Q96JA3 519 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 LRR1Q96L50 414 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 NMNAT3Q96T66 252 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 FOXD3Q9UJU5 478 aaPredicted RBP14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 OSGIN2Q9Y236 505 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 RNF6Q9Y252 685 aa14.7□□□□□ -0.06
CCDC90B-202ENST00000455220 TRGV8A0A0C4DH27 118 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 OR6C68A6NDL8 312 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 DENRO43583 198 aaKnown RBP14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 MPZL2O60487 215 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 MRPL33O75394 65 aaKnown RBP14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 TNFSF13O75888 250 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 MYF6P23409 242 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 KIR2DL2P43627 348 aaPredicted RBP14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 FOXF2Q12947 444 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 ITGADQ13349 1161 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 ESPL1Q14674 2120 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 SLC25A30Q5SVS4 291 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 LEG1Q6P5S2 330 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 NUFIP2Q7Z417 695 aaKnown RBP14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 C20orf196Q8IYI0 205 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 C8orf59Q8N0T1 100 aaPredicted RBP14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 NAXEQ8NCW5 288 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 RHOXF1Q8NHV9 184 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 FBLIM1Q8WUP2 373 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 TMEM54Q969K7 222 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 UBE2FQ969M7 185 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 NMNAT2Q9BZQ4 307 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 Q9H521 79 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 HINT3Q9NQE9 182 aaKnown RBP14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 SH3BGRL2Q9UJC5 107 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 GPR52Q9Y2T5 361 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 MEMO1Q9Y316 297 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 EMC9Q9Y3B6 208 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 FREM1Q5H8C1 2179 aa14.69□□□□□ -0.06
CCDC90B-202ENST00000455220 SLC22A23A1A5C7 686 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 H7C1C5 153 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 TLX2O43763 284 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 SLC43A1O75387 559 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 TMIGD3P0DMS9 266 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 PER3P56645 1201 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 LCN6P62502 163 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 MAD2L1BPQ15013 274 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 TMEM211Q6ICI0 200 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 FAM26EQ8N5C1 309 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 CYB561A3Q8NBI2 242 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 OR6K3Q8NGY3 331 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 FNDC8Q8TC99 324 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 IL4I1Q96RQ9 567 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 RELNP78509 3460 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 OR6C65A6NJZ3 312 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 RENP00797 406 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 EDNRAP25101 427 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 ZNF133P52736 654 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 SLC25A1P53007 311 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 CLRN1P58418 232 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 IL5RAQ01344 420 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 CD47Q08722 323 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 PMPCAQ10713 525 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 AADACL4Q5VUY2 407 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 THAP5Q7Z6K1 395 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 PTP4A1Q93096 173 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 APH1AQ96BI3 265 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 SFXN3Q9BWM7 321 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 LINC00470Q9BZP3 86 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 SYT4Q9H2B2 425 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 GLTPQ9NZD2 209 aa14.68□□□□□ -0.06
CCDC90B-202ENST00000455220 BAHCC1Q9P281 2608 aa14.67□□□□□ -0.06
CCDC90B-202ENST00000455220 FAM183AA6NL82 134 aa14.67□□□□□ -0.06
CCDC90B-202ENST00000455220 PRR23D1E9PI22 279 aaPredicted RBP14.67□□□□□ -0.06
CCDC90B-202ENST00000455220 PRR23D2P0DMB1 279 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms