RNA–Protein interactions for RNA: ENST00000454913.5

NELFE-207, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-207ENST00000454913 ZNF417Q8TAU3 575 aa13.13□□□□□ -0.31
NELFE-207ENST00000454913 PNPT1Q8TCS8 783 aaKnown RBP13.13□□□□□ -0.31
NELFE-207ENST00000454913 AGR3Q8TD06 166 aa13.13□□□□□ -0.31
NELFE-207ENST00000454913 ZNF587Q96SQ5 575 aaPredicted RBP13.13□□□□□ -0.31
NELFE-207ENST00000454913 TSPYL1Q9H0U9 437 aa13.13□□□□□ -0.31
NELFE-207ENST00000454913 RASSF4Q9H2L5 321 aa13.13□□□□□ -0.31
NELFE-207ENST00000454913 PATZ1Q9HBE1 687 aaKnown RBP13.13□□□□□ -0.31
NELFE-207ENST00000454913 SLC6A13Q9NSD5 602 aa13.13□□□□□ -0.31
NELFE-207ENST00000454913 TET2Q6N021 2002 aaPredicted RBP13.12□□□□□ -0.31
NELFE-207ENST00000454913 PLSCR5A0PG75 271 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 HMGN4O00479 90 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 RNASET2O00584 256 aaKnown RBP13.12□□□□□ -0.31
NELFE-207ENST00000454913 ZNF500O60304 480 aaPredicted RBP13.12□□□□□ -0.31
NELFE-207ENST00000454913 DBIP07108 87 aaKnown RBP13.12□□□□□ -0.31
NELFE-207ENST00000454913 MYZAPP0CAP1 466 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 CPA3P15088 417 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 CBLP22681 906 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 CD80P33681 288 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 ACAA2P42765 397 aaKnown RBP13.12□□□□□ -0.31
NELFE-207ENST00000454913 SLC6A9P48067 706 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 LOXL3P58215 753 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 PAX8Q06710 450 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 HNRNPA0Q13151 305 aaKnown RBP13.12□□□□□ -0.31
NELFE-207ENST00000454913 PMS2P3Q13401 168 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 CCDC153Q494R4 210 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 C6orf136Q5SQH8 315 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 FAM205BPQ63HN1 556 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 BTNL3Q6UXE8 466 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 UEVLDQ8IX04 471 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 PEX5LQ8IYB4 626 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 OR10S1Q8NGN2 331 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 TRNT1Q96Q11 434 aaKnown RBP13.12□□□□□ -0.31
NELFE-207ENST00000454913 FMO2Q99518 471 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 PTDSS2Q9BVG9 487 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 BCL2L14Q9BZR8 327 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 MTHFD2LQ9H903 347 aaPredicted RBP13.12□□□□□ -0.31
NELFE-207ENST00000454913 RNF121Q9H920 327 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 PLXNB1O43157 2135 aa13.12□□□□□ -0.31
NELFE-207ENST00000454913 A8MXK9 166 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 PIP5K1CO60331 668 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 CLPXO76031 633 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 TGDSO95455 350 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 IGHV2-70P01814 119 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 NQO1P15559 274 aaKnown RBP13.11□□□□□ -0.31
NELFE-207ENST00000454913 UCP2P55851 309 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 TBC1D28Q2M2D7 210 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 LRRC74BQ6ZQY2 392 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 SKA3Q8IX90 412 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 VPS37AQ8NEZ2 397 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 LINC01006Q8NI28 216 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 FGFBP3Q8TAT2 258 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 GEMIN6Q8WXD5 167 aaKnown RBP13.11□□□□□ -0.31
NELFE-207ENST00000454913 UPRTQ96BW1 309 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 NEURL3Q96EH8 262 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 SLC47A1Q96FL8 570 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 LRR1Q96L50 414 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 DCAF16Q9NXF7 216 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 TBK1Q9UHD2 729 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 TRIM33Q9UPN9 1127 aa13.11□□□□□ -0.31
NELFE-207ENST00000454913 CDHR4A6H8M9 788 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 C5orf63A6NC05 138 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 ZNF726A6NNF4 738 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 TM9SF1O15321 606 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 PLIN3O60664 434 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 IGHV3-13P01766 116 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 PPIAL4GP0DN37 164 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 NR2F1P10589 423 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 G6PDP11413 515 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 RPS4Y1P22090 263 aaKnown RBP13.1□□□□□ -0.31
NELFE-207ENST00000454913 PROK1P58294 105 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 KPRPQ5T749 579 aaPredicted RBP13.1□□□□□ -0.31
NELFE-207ENST00000454913 SAMD5Q5TGI4 173 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 ZNF836Q6ZNA1 936 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 ZNF620Q6ZNG0 422 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 H1FNTQ75WM6 255 aaPredicted RBP13.1□□□□□ -0.31
NELFE-207ENST00000454913 VRK2Q86Y07 508 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 HOMEZQ8IX15 550 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 OR1J1Q8NGS3 322 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 SLC35A5Q9BS91 424 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 MECRQ9BV79 373 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 LRMDAQ9H2I8 198 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 NANOGQ9H9S0 305 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 IL20RAQ9UHF4 553 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 GPR45Q9Y5Y3 372 aa13.1□□□□□ -0.31
NELFE-207ENST00000454913 CHRNGP07510 517 aa13.09□□□□□ -0.31
NELFE-207ENST00000454913 PRG2P13727 222 aa13.09□□□□□ -0.31
NELFE-207ENST00000454913 HLA-DOBP13765 273 aa13.09□□□□□ -0.31
NELFE-207ENST00000454913 GRPRP30550 384 aa13.09□□□□□ -0.31
NELFE-207ENST00000454913 ANXA11P50995 505 aaKnown RBP13.09□□□□□ -0.31
NELFE-207ENST00000454913 EGR4Q05215 589 aa13.09□□□□□ -0.31
NELFE-207ENST00000454913 UGT3A2Q3SY77 523 aa13.09□□□□□ -0.31
NELFE-207ENST00000454913 LIN52Q52LA3 116 aa13.09□□□□□ -0.31
NELFE-207ENST00000454913 XKR7Q5GH72 579 aa13.09□□□□□ -0.31
NELFE-207ENST00000454913 TMEM53Q6P2H8 277 aa13.09□□□□□ -0.31
NELFE-207ENST00000454913 LRRN1Q6UXK5 716 aa13.09□□□□□ -0.31
NELFE-207ENST00000454913 Q6YL49 198 aa13.09□□□□□ -0.31
NELFE-207ENST00000454913 PIWIL3Q7Z3Z3 882 aaKnown RBP13.09□□□□□ -0.31
NELFE-207ENST00000454913 C10orf107Q8IVU9 208 aa13.09□□□□□ -0.31
NELFE-207ENST00000454913 BHLHE22Q8NFJ8 381 aaPredicted RBP13.09□□□□□ -0.31
NELFE-207ENST00000454913 OR1J2Q8NGS2 313 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms