RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 CD3EP07766 207 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 PTAFRP25105 342 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 RRM2P31350 389 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 IST1P53990 364 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 SMIM11AP58511 58 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 FXYD6P3P58550 94 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 PRPS1P60891 318 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 ARF1P84077 181 aaKnown RBP12.38□□□□□ -0.43
HDAC4-205ENST00000454542 RUNX1T1Q06455 604 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 FOXD4Q12950 439 aaPredicted RBP12.38□□□□□ -0.43
HDAC4-205ENST00000454542 KLHL24Q6TFL4 600 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 FAM169BQ8N8A8 192 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 KBTBD8Q8NFY9 601 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF519Q8TB69 540 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 FAM46AQ96IP4 442 aaKnown RBP12.38□□□□□ -0.43
HDAC4-205ENST00000454542 KCNK17Q96T54 332 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 MOV10Q9HCE1 1003 aaKnown RBP12.38□□□□□ -0.43
HDAC4-205ENST00000454542 CCM2LQ9NUG4 571 aaPredicted RBP12.38□□□□□ -0.43
HDAC4-205ENST00000454542 SIGLEC7Q9Y286 467 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 PLEKHA6Q9Y2H5 1048 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 LYVE1Q9Y5Y7 322 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 CCDC168Q8NDH2 2452 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF503-AS2A6NEH8 195 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 AQP12BA6NM10 295 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 HS3ST1O14792 307 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 TRMUO75648 421 aaKnown RBP12.37□□□□□ -0.43
HDAC4-205ENST00000454542 DNAJC8O75937 253 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-205ENST00000454542 GADD45GO95257 159 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 WNT11O96014 354 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 IGKV3-15P01624 115 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 ACADSP16219 412 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 CD40P25942 277 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 HMGA2P52926 109 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 LAPTM4AQ15012 233 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF672Q499Z4 452 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-205ENST00000454542 C10orf128Q5T292 105 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 FAM205BPQ63HN1 556 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 KLHL17Q6TDP4 642 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 TMEM108Q6UXF1 575 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 FAM122BQ7Z309 247 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 OAFQ86UD1 273 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 AQP12AQ8IXF9 295 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 ADGRG5Q8IZF4 528 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF611Q8N823 705 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 OR4C15Q8NGM1 316 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 OR6N1Q8NGY5 312 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 HDAC2Q92769 488 aaKnown RBP12.37□□□□□ -0.43
HDAC4-205ENST00000454542 RSRC1Q96IZ7 334 aaKnown RBP12.37□□□□□ -0.43
HDAC4-205ENST00000454542 TSPAN32Q96QS1 320 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 GPA33Q99795 319 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 FOXB1Q99853 325 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 FOXC2Q99958 501 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 TRIM15Q9C019 465 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF224Q9NZL3 707 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 MGAT4BQ9UQ53 548 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 PRRC2AP48634 2157 aaKnown RBP12.37□□□□□ -0.43
HDAC4-205ENST00000454542 VPS13CQ709C8 3753 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 CADP27708 2225 aa12.37□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF469Q96JG9 3925 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-205ENST00000454542 MCIDASD6RGH6 385 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 ABCD4O14678 606 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 PTP4A3O75365 173 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 SEC14L2O76054 403 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 CD14P08571 375 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 CDH2P19022 906 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-205ENST00000454542 DNASE1P24855 282 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 FPR3P25089 353 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF83P51522 516 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 RPL27P61353 136 aaKnown RBP12.36□□□□□ -0.43
HDAC4-205ENST00000454542 SPOCK1Q08629 439 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 NRN1LQ496H8 165 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 ZBED5Q49AG3 693 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 ALKBH2Q6NS38 261 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 LRFN4Q6PJG9 635 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 ZER1Q7Z7L7 766 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 CCDC36Q8IYA8 594 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 CDK20Q8IZL9 346 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 OR52J3Q8NH60 311 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 OR51A7Q8NH64 312 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 AKAP1Q92667 903 aaKnown RBP eCLIP12.36□□□□□ -0.43
HDAC4-205ENST00000454542 RADILQ96JH8 1075 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 ALPK1Q96QP1 1244 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 TNFRSF13CQ96RJ3 184 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 ALG12Q9BV10 488 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 CADM1Q9BY67 442 aaKnown RBP12.36□□□□□ -0.43
HDAC4-205ENST00000454542 UBTD1Q9HAC8 227 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 SMURF2Q9HAU4 748 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 KRCC1Q9NPI7 259 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-205ENST00000454542 B3GNT2Q9NY97 397 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 EDARQ9UNE0 448 aa12.36□□□□□ -0.43
HDAC4-205ENST00000454542 A0A096LPE4 126 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 IGHV1-18A0A0C4DH31 117 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 A0A1W2PPZ6 126 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 GSC2O15499 205 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 DHHO43323 396 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 TMCC2O75069 709 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 KRT36O76013 467 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 RAP2AP10114 183 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 B4GALT1P15291 398 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 HOXB6P17509 224 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms