RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PDCD5O14737 125 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 PLPP2O43688 288 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 GIMD1P0DJR0 217 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 SLC2A1P11166 492 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 PITPNAQ00169 270 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 TLE3Q04726 772 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 FMODQ06828 376 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 ELAVL1Q15717 326 aaKnown RBP10.87□□□□□ -0.67
SMPD4-213ENST00000454468 OR10K2Q6IF99 312 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 GUSBP11Q6P575 273 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 PAPD4Q6PIY7 484 aaKnown RBP10.87□□□□□ -0.67
SMPD4-213ENST00000454468 TRIM63Q969Q1 353 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 SHDQ96IW2 340 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 PELOQ9BRX2 385 aaKnown RBP10.87□□□□□ -0.67
SMPD4-213ENST00000454468 OR2B2Q9GZK3 357 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 ATG5Q9H1Y0 275 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 INPP5EQ9NRR6 644 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 EPHA6Q9UF33 1036 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 COA3Q9Y2R0 106 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-213ENST00000454468 ARPC1BO15143 372 aaKnown RBP10.87□□□□□ -0.67
SMPD4-213ENST00000454468 FABP7O15540 132 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 H2AFB2P0C5Z0 115 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 STOMP27105 288 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 ZNF141Q15928 474 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 ZNF615Q8N8J6 731 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 ZNF431Q8TF32 576 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-213ENST00000454468 DEDD2Q8WXF8 326 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 DVL3Q92997 716 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-213ENST00000454468 KLHL15Q96M94 604 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 PPP1R3EQ9H7J1 279 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 SLCO1C1Q9NYB5 712 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 PRRC2CQ9Y520 2896 aaKnown RBP10.87□□□□□ -0.67
SMPD4-213ENST00000454468 A0A1B0GX78 115 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 RPS4Y1P22090 263 aaKnown RBP10.86□□□□□ -0.67
SMPD4-213ENST00000454468 INPP5JQ15735 1006 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-213ENST00000454468 SCGB2B2Q4G0G5 96 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 TMEM225Q6GV28 225 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 OR8H3Q8N146 312 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 OR52I2Q8NH67 350 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 MR1Q95460 341 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 RNF170Q96K19 258 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 DEFB126Q9BYW3 111 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 PPP4R1LQ9P1A2 415 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 CGGBP1Q9UFW8 167 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-213ENST00000454468 A0A1W2PNR3 127 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 WISP1O95388 367 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 UCHL1P09936 223 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 SDHAP31040 664 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 HTR2BP41595 481 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 ZNF81P51508 661 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 UBE2MP61081 183 aaKnown RBP10.86□□□□□ -0.67
SMPD4-213ENST00000454468 FUT7Q11130 342 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 TRAM1Q15629 374 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 MRGPREQ86SM8 312 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 CDH24Q86UP0 819 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 ESX1Q8N693 406 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 ADAMTS18Q8TE60 1221 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 FCAMRQ8WWV6 532 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 SMOC1Q9H4F8 434 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 APMAPQ9HDC9 416 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 CKLFQ9UBR5 152 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 RARRES3Q9UL19 164 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 MGAT4AQ9UM21 535 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 SIT1Q9Y3P8 196 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 ALPK3Q96L96 1907 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 LYPD3O95274 346 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 TCRBP04435 133 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 CD2P06729 351 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 IL11P20809 199 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 GUCA1AP43080 201 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-213ENST00000454468 LTBQ06643 244 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 CAMK2DQ13557 499 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 NKAIN1Q4KMZ8 207 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 ZNF782Q6ZMW2 699 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-213ENST00000454468 C9orf40Q8IXQ3 194 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 SLC25A45Q8N413 288 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 LSMEM1Q8N8F7 131 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 ARL5BQ96KC2 179 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 TSPAN32Q96QS1 320 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 OR5B2Q96R09 309 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 WWTR1Q9GZV5 400 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 PRDM6Q9NQX0 595 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 CYSLTR2Q9NS75 346 aa10.86□□□□□ -0.67
SMPD4-213ENST00000454468 ARPC4-TTLL3A0A0A6YYG9 625 aa10.85□□□□□ -0.67
SMPD4-213ENST00000454468 A0A0A6YYJ9 748 aa10.85□□□□□ -0.67
SMPD4-213ENST00000454468 TRABD2BA6NFA1 517 aa10.85□□□□□ -0.67
SMPD4-213ENST00000454468 MASP2O00187 686 aa10.85□□□□□ -0.67
SMPD4-213ENST00000454468 CDK2AP1O14519 115 aa10.85□□□□□ -0.67
SMPD4-213ENST00000454468 HLA-DOBP13765 273 aa10.85□□□□□ -0.67
SMPD4-213ENST00000454468 FOSL2P15408 326 aa10.85□□□□□ -0.67
SMPD4-213ENST00000454468 CFL1P23528 166 aaKnown RBP10.85□□□□□ -0.67
SMPD4-213ENST00000454468 ART1P52961 327 aa10.85□□□□□ -0.67
SMPD4-213ENST00000454468 NXPH1P58417 271 aa10.85□□□□□ -0.67
SMPD4-213ENST00000454468 SMAD4Q13485 552 aaKnown RBP10.85□□□□□ -0.67
SMPD4-213ENST00000454468 CBFBQ13951 182 aa10.85□□□□□ -0.67
SMPD4-213ENST00000454468 RNLSQ5VYX0 342 aa10.85□□□□□ -0.67
SMPD4-213ENST00000454468 DMKNQ6E0U4 476 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-213ENST00000454468 NDUFAF7Q7L592 441 aa10.85□□□□□ -0.67
SMPD4-213ENST00000454468 NUP210Q8TEM1 1887 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-213ENST00000454468 NPRL2Q8WTW4 380 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms