RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 RFPL4BQ6ZWI9 263 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 H1FNTQ75WM6 255 aaPredicted RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TSPYL5Q86VY4 417 aaPredicted RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SKA3Q8IX90 412 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MSRB3Q8IXL7 192 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF101Q8IZC7 436 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FAM169BQ8N8A8 192 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SMYD1Q8NB12 490 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SLC30A7Q8NEW0 376 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OR4M2Q8NGB6 313 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OR4K5Q8NGD3 323 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 AENQ8WTP8 325 aaKnown RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 IPCEF1Q8WWN9 437 aaPredicted RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SLC38A4Q969I6 547 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RBM4Q9BWF3 364 aaKnown RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CACYBPQ9HB71 228 aaKnown RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 HINT3Q9NQE9 182 aaKnown RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SLC25A37Q9NYZ2 338 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SLAMF8Q9P0V8 285 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 POFUT2Q9Y2G5 429 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 DNAH3Q8TD57 4116 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 A0A0B4J2E0 115 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 IGHV1-69-2A0A0G2JMI3 117 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 A0A1B0GX12 115 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CPSF4LA6NMK7 179 aaKnown RBP5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C17orf100A8MU93 164 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C5orf58C9J3I9 102 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CLDN25C9JDP6 229 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RGS16O15492 202 aaPredicted RBP5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SPRY3O43610 288 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FZD7O75084 574 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SLC2A10O95528 541 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FSHBP01225 129 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ADORA3P0DMS8 318 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 HOXB9P17482 250 aaPredicted RBP5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CCNOP22674 350 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CDAP32320 146 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GLRXP35754 106 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 WNT5AP41221 380 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RAD52P43351 418 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MAP2K6P52564 334 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CDH12P55289 794 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RPS23P62266 143 aaKnown RBP5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FMODQ06828 376 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LRRC74AQ0VAA2 488 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 STX3Q13277 289 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NPTX1Q15818 432 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TUSC1Q2TAM9 212 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PDLIM3Q53GG5 364 aaPredicted RBP5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PRR31Q5SQ13 230 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GCNT6Q5T4J0 391 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OTPQ5XKR4 325 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LEG1Q6P5S2 330 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TMEM154Q6P9G4 183 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CNPY4Q8N129 248 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LRRC18Q8N456 261 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SLC22A24Q8N4F4 322 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LRRC17Q8N6Y2 441 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CLDN22Q8N7P3 220 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SYT14Q8NB59 555 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SGMS2Q8NHU3 365 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 VANGL1Q8TAA9 524 aaPredicted RBP5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 BBS10Q8TAM1 723 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SNX33Q8WV41 574 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZFAND2BQ8WV99 257 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF48Q96MX3 618 aaPredicted RBP5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZIM3Q96PE6 472 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF347Q96SE7 839 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF416Q9BWM5 594 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SUCNR1Q9BXA5 334 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ASPNQ9BXN1 380 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PAIP1Q9H074 479 aaKnown RBP5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PIF1Q9H611 641 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 UNKLQ9H9P5 680 aaKnown RBP5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SAP30LQ9HAJ7 183 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CDH20Q9HBT6 801 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NPHS2Q9NP85 383 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 KCNK9Q9NPC2 374 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 A4GALTQ9NPC4 353 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MMP26Q9NRE1 261 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TNFRSF19Q9NS68 423 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TMEM38BQ9NVV0 291 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CALML5Q9NZT1 146 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF69Q9UC07 566 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SLC7A8Q9UHI5 535 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 HAO1Q9UJM8 370 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ANGPT4Q9Y264 503 aa5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 KMT2CQ8NEZ4 4911 aaKnown RBP5.09□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NBEAL2Q6ZNJ1 2754 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 A0A0A6YYJ9 748 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IGKV1D-43A0A0B4J1Z2 117 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 A0A0G2JPF8 293 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IGHV3-64DA0A0J9YX35 117 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TMEM247A6NEH6 219 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF726A6NNF4 738 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 VSTM5A8MXK1 200 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HNRNPCL2B2RXH8 293 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HNRNPCL3B7ZW38 293 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLCO1B7G3V0H7 640 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CLIC1O00299 241 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms