RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 GPX7Q96SL4 187 aaPredicted RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 OPN3Q9H1Y3 402 aaPredicted RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 TXNIPQ9H3M7 391 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 DENND2DQ9H6A0 471 aaPredicted RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 C12orf49Q9H741 205 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF556Q9HAH1 456 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 MOV10Q9HCE1 1003 aaKnown RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 ASB6Q9NWX5 421 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 UPB1Q9UBR1 384 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 SEC14L4Q9UDX3 406 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 ENOPH1Q9UHY7 261 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 SIGLEC7Q9Y286 467 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 FREM1Q5H8C1 2179 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 NKX2-6A6NCS4 301 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 MCIDASD6RGH6 385 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF587BE7ETH6 402 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 C11orf98E9PRG8 122 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 C16orf97H3BN30 126 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 RPL36A-HNRNPH2H7BZ11 118 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 IMPA2O14732 288 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 IDH3BO43837 385 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 PTP4A3O75365 173 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 TIPRLO75663 272 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 KRT33AO76009 404 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 HPRP00739 348 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 IGHG1P01857 330 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 IFNGR1P15260 489 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 IGFBP2P18065 325 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 PTNP21246 168 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 SLC6A6P31641 620 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 RPL4P36578 427 aaKnown RBP7.69□□□□□ -1.18
COL28A1-205ENST00000453441 AQP2P41181 271 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 RPS6KA3P51812 740 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 RPL27P61353 136 aaKnown RBP7.69□□□□□ -1.18
COL28A1-205ENST00000453441 FOXD4Q12950 439 aaPredicted RBP7.69□□□□□ -1.18
COL28A1-205ENST00000453441 NIPAL3Q6P499 406 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF474Q6S9Z5 364 aaPredicted RBP7.69□□□□□ -1.18
COL28A1-205ENST00000453441 NHLRC1Q6VVB1 395 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 DPY19L2P2Q6ZN68 376 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 RASSF6Q6ZTQ3 369 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 ZER1Q7Z7L7 766 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 ZDHHC13Q8IUH4 622 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 TMEM123Q8N131 208 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 UBE2J2Q8N2K1 259 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 GPR137CQ8N3F9 429 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 C17orf78Q8N4C9 275 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 AQP11Q8NBQ7 271 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 ACBD4Q8NC06 268 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 OR52L1Q8NGH7 329 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 OR13C2Q8NGS9 318 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 OR6N1Q8NGY5 312 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 OR51A7Q8NH64 312 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 OR5K1Q8NHB7 308 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 FANK1Q8TC84 345 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 KISS1RQ969F8 398 aaPredicted RBP7.69□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF566Q969W8 418 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 SLC25A44Q96H78 314 aaPredicted RBP7.69□□□□□ -1.18
COL28A1-205ENST00000453441 BOD1Q96IK1 185 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 OR2M2Q96R28 347 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 SNX18Q96RF0 628 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 TNFRSF13CQ96RJ3 184 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 ALG12Q9BV10 488 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 POLDIP3Q9BY77 421 aaKnown RBP7.69□□□□□ -1.18
COL28A1-205ENST00000453441 UCK2Q9BZX2 261 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 ENKD1Q9H0I2 346 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 SMURF2Q9HAU4 748 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 OBP2BQ9NPH6 170 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 GALNT8Q9NY28 637 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 TAS2R16Q9NYV7 291 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 NDRG3Q9UGV2 375 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 BAIAP2Q9UQB8 552 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 CDH10Q9Y6N8 788 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 U3KQV3 271 aa7.69□□□□□ -1.18
COL28A1-205ENST00000453441 TRAV27A0A087WT01 109 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 G3V2T6 193 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 PDLIM1O00151 329 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 XKRYO14609 159 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 CDC42EP2O14613 210 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 ARPC3O15145 178 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 TXNDC12O95881 172 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 RNF224P0DH78 156 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 HLA-DOBP13765 273 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 FUT4P22083 530 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 IL32P24001 234 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 MPGP29372 298 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 UGT2B10P36537 528 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 CSNK1A1P48729 337 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 SELENOPP49908 381 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 BIDP55957 195 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 CTXN1P60606 82 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 FHL1Q13642 323 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 CDSNQ15517 529 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 ACKR1Q16570 336 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 RFX4Q33E94 735 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 NRN1LQ496H8 165 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 ARMC4Q5T2S8 1044 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 SFRP5Q5T4F7 317 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 HMBOX1Q6NT76 420 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF620Q6ZNG0 422 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 ADCK1Q86TW2 530 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms