RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 ZNF682O95780 498 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 F12P00748 615 aaPredicted RBP16■□□□□ 0.15
PDLIM2-214ENST00000452226 IFNW1P05000 195 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 CSF3P09919 207 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 FUT4P22083 530 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 PAX7P23759 505 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 TUBA1BP68363 451 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 TUBA4AP68366 448 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 VLDLRP98155 873 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 ROR2Q01974 943 aaKnown RBP16■□□□□ 0.15
PDLIM2-214ENST00000452226 ST3GAL3Q11203 375 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 ANKRD16Q6P6B7 361 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 TUBA1AQ71U36 451 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 TSEN54Q7Z6J9 526 aaKnown RBP16■□□□□ 0.15
PDLIM2-214ENST00000452226 TMEM123Q8N131 208 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 LRRC17Q8N6Y2 441 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 RNF148Q8N7C7 305 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 ANKK1Q8NFD2 765 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 TMEM239Q8WW34 195 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 LIPHQ8WWY8 451 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 FAM162AQ96A26 154 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 HSH2DQ96JZ2 352 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 OR2M2Q96R28 347 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 CDRT15Q96T59 188 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 KATNB1Q9BVA0 655 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 GORASP2Q9H8Y8 452 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 DCAF13Q9NV06 445 aaKnown RBP16■□□□□ 0.15
PDLIM2-214ENST00000452226 TAS2R5Q9NYW4 299 aa16■□□□□ 0.15
PDLIM2-214ENST00000452226 ARPC4-TTLL3A0A0A6YYG9 625 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 FFAR1O14842 300 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 SLC43A1O75387 559 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 CRYAAP02489 173 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 ADORA3P0DMS8 318 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 MNAT1P51948 309 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 SH3BGRP55822 239 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 SPATS1Q496A3 300 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 SAMD4BQ5PRF9 694 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 C16orf89Q6UX73 402 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 OFCC1Q8IZS5 231 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 FAM156AQ8NDB6 213 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 PFN4Q8NHR9 129 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 MAGEE2Q8TD90 523 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 NELFAQ9H3P2 528 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 CA10Q9NS85 328 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 MAN2C1Q9NTJ4 1040 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 NDE1Q9NXR1 346 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 CRNNQ9UBG3 495 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 RPS6KA6Q9UK32 745 aa15.99■□□□□ 0.15
PDLIM2-214ENST00000452226 J3KTA2 159 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 AKAP8O43823 692 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 TSPAN19P0C672 248 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 CECR9P0C854 216 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 USF1P22415 310 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 SERPINF1P36955 418 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 SNRPD2P62316 118 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 ARF1P84077 181 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 IL1RL1Q01638 556 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 NAAAQ02083 359 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 POU3F1Q03052 451 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 C3orf36Q3SXR2 165 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 FKBP9P1Q75LS8 142 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 WDFY1Q8IWB7 410 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 DEFB107AQ8IZN7 70 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 NSL1Q96IY1 281 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 TXNDC15Q96J42 360 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 LRR1Q96L50 414 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 SORCS2Q96PQ0 1159 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 KCNK17Q96T54 332 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 C20orf141Q9NUB4 165 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 CDC42EP3Q9UKI2 254 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 FKBP7Q9Y680 259 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 CUBNO60494 3623 aa15.98■□□□□ 0.15
PDLIM2-214ENST00000452226 SLC35F4A4IF30 521 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 HTR3EA5X5Y0 456 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 OR7A10O76100 309 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 OR6A2O95222 327 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 IGLV1-44P01699 117 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 T-ENOLP0DO92 83 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 HOXB1P14653 301 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 FUT1P19526 365 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 AHCYP23526 432 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 IFNA8P32881 189 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 YAP1P46937 504 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 CYB5R2Q6BCY4 276 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 VHLLQ6RSH7 139 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 C20orf196Q8IYI0 205 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 GPR137CQ8N3F9 429 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 FAM169BQ8N8A8 192 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 RBM15BQ8NDT2 890 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 PIK3C3Q8NEB9 887 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 SGTBQ96EQ0 304 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 C7orf34Q96L11 122 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 VRK1Q99986 396 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 EMC6Q9BV81 110 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 FNDC11Q9BVV2 318 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 SEC61A2Q9H9S3 476 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 GPR35Q9HC97 309 aa15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 MOV10Q9HCE1 1003 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-214ENST00000452226 MED29Q9NX70 200 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms