RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 TRABD2BA6NFA1 517 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 EIF1BO60739 113 aaKnown RBP12.76□□□□□ -0.37
USP39-207ENST00000450066 WT1P19544 449 aaPredicted RBP12.76□□□□□ -0.37
USP39-207ENST00000450066 CRABP1P29762 137 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 GABRA5P31644 462 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 TGFBR1P36897 503 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 BLVRAP53004 296 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 CSNK2A1P68400 391 aaPredicted RBP12.76□□□□□ -0.37
USP39-207ENST00000450066 HSF2Q03933 536 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 MFAP5Q13361 173 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 GPR50Q13585 617 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 TBC1D25Q3MII6 688 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 SOWAHCQ53LP3 525 aaPredicted RBP12.76□□□□□ -0.37
USP39-207ENST00000450066 SSX6Q7RTT6 188 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 SULF2Q8IWU5 870 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 UEVLDQ8IX04 471 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 TIGD4Q8IY51 512 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 SYS1Q8N2H4 156 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 KBTBD8Q8NFY9 601 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 MRPL48Q96GC5 212 aaKnown RBP12.76□□□□□ -0.37
USP39-207ENST00000450066 C4orf36Q96KX1 117 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 OXGR1Q96P68 337 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 DCSTAMPQ9H295 470 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 MARCH7Q9H992 704 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 TRIM36Q9NQ86 728 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 MED29Q9NX70 200 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 B4GALT7Q9UBV7 327 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 ZMIZ1Q9ULJ6 1067 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 SF3B6Q9Y3B4 125 aaKnown RBP12.76□□□□□ -0.37
USP39-207ENST00000450066 ZNF814B7Z6K7 855 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 SLC16A7O60669 478 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 TRAPPC6AO75865 159 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 SP1P08047 785 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 CDONQ4KMG0 1287 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 RFLNBQ8N5W9 214 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 SLC39A7Q92504 469 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 TXNDC15Q96J42 360 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 KLHL15Q96M94 604 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 KCNK17Q96T54 332 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 HES7Q9BYE0 225 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 RERGLQ9H628 205 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 SSR3Q9UNL2 185 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 POLHQ9Y253 713 aa12.76□□□□□ -0.37
USP39-207ENST00000450066 KLF13Q9Y2Y9 288 aaPredicted RBP12.76□□□□□ -0.37
USP39-207ENST00000450066 ALPK2Q86TB3 2170 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 IGLV1-36A0A0B4J1U3 117 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 PNMA8CA0A1B0GUJ8 204 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 LINC01387J3KSC0 135 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 J3QLW9 94 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 DNPH1O43598 174 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 NME2P1O60361 137 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 CTLA4P16410 223 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 ZNF19P17023 458 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 CELP19835 753 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 NME2P22392 152 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 OR12D2P58182 307 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 TAS2R43P59537 309 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 DGUOKQ16854 277 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 SLC25A25Q6KCM7 469 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 VASH1Q7L8A9 365 aaPredicted RBP12.75□□□□□ -0.37
USP39-207ENST00000450066 HDDC2Q7Z4H3 204 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 GPAT4Q86UL3 456 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 ZFP41Q8N8Y5 198 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 HAS2Q92819 552 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 SFXN2Q96NB2 322 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 MNTQ99583 582 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 TSPAN10Q9H1Z9 355 aaPredicted RBP12.75□□□□□ -0.37
USP39-207ENST00000450066 ZNF552Q9H707 407 aaPredicted RBP12.75□□□□□ -0.37
USP39-207ENST00000450066 ZNF703Q9H7S9 590 aaPredicted RBP12.75□□□□□ -0.37
USP39-207ENST00000450066 COPS3Q9UNS2 423 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 RASD1Q9Y272 281 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 AKAP13Q12802 2813 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 CFAP47Q6ZTR5 3102 aa12.75□□□□□ -0.37
USP39-207ENST00000450066 A0A0J9YW62 118 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 ZNF891A8MT65 544 aaPredicted RBP12.74□□□□□ -0.37
USP39-207ENST00000450066 TRAF3IP2O43734 574 aaPredicted RBP12.74□□□□□ -0.37
USP39-207ENST00000450066 CLPXO76031 633 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 HPNP05981 417 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 CD46P15529 392 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 BIDP55957 195 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 WIPI1Q5MNZ9 446 aaPredicted RBP12.74□□□□□ -0.37
USP39-207ENST00000450066 CD200R1LQ6Q8B3 271 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 CDC20BQ86Y33 519 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 EGFL6Q8IUX8 553 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 SNX33Q8WV41 574 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 TMEM203Q969S6 136 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 INTS14Q96SY0 518 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 NAA11Q9BSU3 229 aaPredicted RBP12.74□□□□□ -0.37
USP39-207ENST00000450066 MFRPQ9BY79 579 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 RNF167Q9H6Y7 350 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 EXOSC4Q9NPD3 245 aaKnown RBP12.74□□□□□ -0.37
USP39-207ENST00000450066 MED12Q93074 2177 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 TVP23AA6NH52 213 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 CENPBD1B2RD01 187 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 ZNF670-ZNF695F2Z2N8 137 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 KLRC4-KLRK1H3BQV0 150 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 GFRA3O60609 400 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 VAMP5O95183 116 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 ZNF43P17038 809 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 AGFG1P52594 562 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms