RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 ZNF888P0CJ79 500 aaPredicted RBP12.86□□□□□ -0.35
ITGB4-202ENST00000449880 EPHA1P21709 976 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 P2RY2P41231 377 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 SPOCK1Q08629 439 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 C19orf57Q0VDD7 668 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 TMEM201Q5SNT2 666 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 SENP5Q96HI0 755 aaPredicted RBP12.86□□□□□ -0.35
ITGB4-202ENST00000449880 OR2A14Q96R47 310 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 RNF167Q9H6Y7 350 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 HRASLSQ9HDD0 168 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 TAF1LQ8IZX4 1826 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 GPR171O14626 319 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 MPPED1O15442 326 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 LCATP04180 440 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 TBPP20226 339 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
ITGB4-202ENST00000449880 ARG2P78540 354 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 NLGN4YQ8NFZ3 816 aaPredicted RBP12.86□□□□□ -0.35
ITGB4-202ENST00000449880 C17orf105B2RV13 164 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 RAB4AP20338 218 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 MMP15P51511 669 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 RANP62826 216 aaKnown RBP12.85□□□□□ -0.35
ITGB4-202ENST00000449880 H3F3AP84243 136 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 GAB1Q13480 694 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 ZNF765Q7L2R6 523 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 ZNF761Q86XN6 746 aaPredicted RBP12.85□□□□□ -0.35
ITGB4-202ENST00000449880 MRPL43Q8N983 215 aaKnown RBP12.85□□□□□ -0.35
ITGB4-202ENST00000449880 FAM71F1Q96KD3 344 aaPredicted RBP12.85□□□□□ -0.35
ITGB4-202ENST00000449880 MYEF2Q9P2K5 600 aaKnown RBP12.85□□□□□ -0.35
ITGB4-202ENST00000449880 LRP5LA4QPB2 252 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 BHLHE40O14503 412 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 SOCS6O14544 535 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 YKT6O15498 198 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 ACSM4P0C7M7 580 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 PTAFRP25105 342 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 KIR2DL3P43628 341 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 RBM39Q14498 530 aaKnown RBP12.85□□□□□ -0.35
ITGB4-202ENST00000449880 MRPL21Q7Z2W9 205 aaKnown RBP12.85□□□□□ -0.35
ITGB4-202ENST00000449880 KIAA1958Q8N8K9 716 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 BBS1Q8NFJ9 593 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 NANPQ8TBE9 248 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 MAGEB4O15481 346 aaPredicted RBP12.85□□□□□ -0.35
ITGB4-202ENST00000449880 TAPBPO15533 448 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 CHRM2P08172 466 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 CPMP14384 443 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 TNFSF4P23510 183 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 TSFMP43897 325 aaKnown RBP12.85□□□□□ -0.35
ITGB4-202ENST00000449880 EPHA4P54764 986 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 VASNQ6EMK4 673 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 FAM71E1Q6IPT2 247 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 MEX3DQ86XN8 651 aaKnown RBP12.85□□□□□ -0.35
ITGB4-202ENST00000449880 SYS1Q8N2H4 156 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 FAM71CQ8NEG0 241 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 C2CD4CQ8TF44 421 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 CCNL2Q96S94 520 aaPredicted RBP12.85□□□□□ -0.35
ITGB4-202ENST00000449880 TMEM59Q9BXS4 323 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 METTL9Q9H1A3 318 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 ZCCHC4Q9H5U6 513 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 MDFIC2A0A1B0GVS7 189 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 MMP11P24347 488 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 TACR3P29371 465 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 HSD17B7P56937 341 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 TAF9Q16594 264 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 MRPL2Q5T653 305 aaKnown RBP12.85□□□□□ -0.35
ITGB4-202ENST00000449880 SLCO4C1Q6ZQN7 724 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 LANCL3Q6ZV70 420 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 TMEM106AQ96A25 262 aa12.85□□□□□ -0.35
ITGB4-202ENST00000449880 FOLR1P15328 257 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 UBE2IP63279 158 aaKnown RBP12.84□□□□□ -0.35
ITGB4-202ENST00000449880 ZNF620Q6ZNG0 422 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 DPY19L4Q7Z388 723 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 GDF7Q7Z4P5 450 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 BPHLQ86WA6 291 aaPredicted RBP12.84□□□□□ -0.35
ITGB4-202ENST00000449880 SORBS1Q9BX66 1292 aaKnown RBP12.84□□□□□ -0.35
ITGB4-202ENST00000449880 GPR160Q9UJ42 338 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 LGI1O95970 557 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 OR8G3PP0DMU2 310 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 CPN1P15169 458 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 OR4D6Q8NGJ1 314 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 EDAQ92838 391 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 OR5B2Q96R09 309 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 ATF6BQ99941 703 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 CXorf36Q9H7Y0 433 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 KCNIP2Q9NS61 270 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 PTRH2Q9Y3E5 179 aaKnown RBP12.84□□□□□ -0.35
ITGB4-202ENST00000449880 TIMM8BQ9Y5J9 83 aaPredicted RBP12.84□□□□□ -0.35
ITGB4-202ENST00000449880 CER1O95813 267 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 SFTPDP35247 375 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 DGCR2P98153 550 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 ADAM5Q6NVV9 412 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 B3GLCTQ6Y288 498 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 Q6ZTK2 550 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 MFSD9Q8NBP5 474 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 OR51S1Q8NGJ8 323 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 OR52I2Q8NH67 350 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 SGK3Q96BR1 496 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 DTD2Q96FN9 168 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 GLCEO94923 617 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 MTHFD2P13995 350 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 PAX6P26367 422 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms