RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 SYT14Q8NB59 555 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 ASB10Q8WXI3 467 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 TMEM54Q969K7 222 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 NDEL1Q9GZM8 345 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 TXNIPQ9H3M7 391 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 UBTD1Q9HAC8 227 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 EDARQ9UNE0 448 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 POMPQ9Y244 141 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 MAGED1Q9Y5V3 778 aaPredicted RBP13.76□□□□□ -0.21
TOP3B-211ENST00000449704 CCDC168Q8NDH2 2452 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 ROS1P08922 2347 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 DHRS12A0PJE2 317 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 UNC119BA6NIH7 251 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 AQP12BA6NM10 295 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 ZNF99A8MXY4 864 aaPredicted RBP13.75□□□□□ -0.21
TOP3B-211ENST00000449704 TRMUO75648 421 aaKnown RBP13.75□□□□□ -0.21
TOP3B-211ENST00000449704 QDPRP09417 244 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 PGA4P0DJD7 388 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 PGA3P0DJD8 388 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 RAP2AP10114 183 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 ACADSP16219 412 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 IFNGR2P38484 337 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 CAPZA2P47755 286 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 LIMS1P48059 325 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 ERFP50548 548 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 RPL27P61353 136 aaKnown RBP13.75□□□□□ -0.21
TOP3B-211ENST00000449704 ERVK-25P63136 954 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 CBX1P83916 185 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 MYBPC1Q00872 1141 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 ARMC4Q5T2S8 1044 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 LRFN4Q6PJG9 635 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 ZNF813Q6ZN06 617 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 ZER1Q7Z7L7 766 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 AQP12AQ8IXF9 295 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 ADGRG5Q8IZF4 528 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 LRRC75AQ8NAA5 344 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 CANT1Q8WVQ1 401 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 RSRC1Q96IZ7 334 aaKnown RBP13.75□□□□□ -0.21
TOP3B-211ENST00000449704 GPA33Q99795 319 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 CHID1Q9BWS9 393 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 STX18Q9P2W9 335 aaKnown RBP13.75□□□□□ -0.21
TOP3B-211ENST00000449704 ITGB1BP2Q9UKP3 347 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 ZNF346Q9UL40 294 aaKnown RBP13.75□□□□□ -0.21
TOP3B-211ENST00000449704 PLEKHA6Q9Y2H5 1048 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 RNF115Q9Y4L5 304 aa13.75□□□□□ -0.21
TOP3B-211ENST00000449704 DHHO43323 396 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 PTP4A3O75365 173 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 HOXB1P14653 301 aaPredicted RBP13.74□□□□□ -0.21
TOP3B-211ENST00000449704 ZNF26P17031 533 aaPredicted RBP13.74□□□□□ -0.21
TOP3B-211ENST00000449704 DNASE1P24855 282 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 ACVR1BP36896 505 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 PPP1R8Q12972 351 aaKnown RBP13.74□□□□□ -0.21
TOP3B-211ENST00000449704 KEAP1Q14145 624 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 TAF11Q15544 211 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 OR2T5Q6IEZ7 315 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 TMEM108Q6UXF1 575 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 CCDC121Q6ZUS5 278 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 NOXO1Q8NFA2 376 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 OR2T29Q8NH02 315 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 MAGEE2Q8TD90 523 aaPredicted RBP13.74□□□□□ -0.21
TOP3B-211ENST00000449704 BOD1Q96IK1 185 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 FOXB1Q99853 325 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 TMEM204Q9BSN7 226 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 KATNB1Q9BVA0 655 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 NELFAQ9H3P2 528 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 REEP1Q9H902 201 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 OBP2BQ9NPH6 170 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 IL20RAQ9UHF4 553 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 SLC7A8Q9UHI5 535 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 ST6GALNAC2Q9UJ37 374 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 SIGLEC7Q9Y286 467 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 LYVE1Q9Y5Y7 322 aa13.74□□□□□ -0.21
TOP3B-211ENST00000449704 NPIPB13A6NJU9 1138 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 NPIPB4C9JG80 1138 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 ABCD4O14678 606 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 CCNB2O95067 398 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 NDUFB2O95178 105 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 CD14P08571 375 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 B4GALT1P15291 398 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 PTAFRP25105 342 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 CD40P25942 277 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 HMGA2P52926 109 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 CD47Q08722 323 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 C1QTNF12Q5T7M4 302 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 ADAM5Q6NVV9 412 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 PAMR1Q6UXH9 720 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 PIAS4Q8N2W9 510 aaPredicted RBP13.73□□□□□ -0.21
TOP3B-211ENST00000449704 GNPDA2Q8TDQ7 276 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 AKAP1Q92667 903 aaKnown RBP eCLIP13.73□□□□□ -0.21
TOP3B-211ENST00000449704 HDAC2Q92769 488 aaKnown RBP13.73□□□□□ -0.21
TOP3B-211ENST00000449704 TSPAN32Q96QS1 320 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 MRPL13Q9BYD1 178 aaKnown RBP13.73□□□□□ -0.21
TOP3B-211ENST00000449704 LRMDAQ9H2I8 198 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 CCM2LQ9NUG4 571 aaPredicted RBP13.73□□□□□ -0.21
TOP3B-211ENST00000449704 GRHPRQ9UBQ7 328 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 ADAM18Q9Y3Q7 739 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 SAMHD1Q9Y3Z3 626 aaKnown RBP13.73□□□□□ -0.21
TOP3B-211ENST00000449704 U3KQV3 271 aa13.73□□□□□ -0.21
TOP3B-211ENST00000449704 ARPC4-TTLL3A0A0A6YYG9 625 aa13.72□□□□□ -0.21
TOP3B-211ENST00000449704 A6NIZ1 184 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms