RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 GPRIN2O60269 458 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 OR7A10O76100 309 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 F12P00748 615 aaPredicted RBP11.33□□□□□ -0.6
SEC22C-209ENST00000449617 MT-ND1P03886 318 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 CSF3P09919 207 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 RBM34P42696 430 aaKnown RBP11.33□□□□□ -0.6
SEC22C-209ENST00000449617 PIGFQ07326 219 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 EFNB3Q15768 340 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 GSG1Q2KHT4 349 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 ANKS4BQ8N8V4 417 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 C10orf105Q8TEF2 133 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 ZNF566Q969W8 418 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 SLC25A44Q96H78 314 aaPredicted RBP11.33□□□□□ -0.6
SEC22C-209ENST00000449617 TPD52L3Q96J77 140 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 POLR2J2Q9GZM3 115 aaKnown RBP11.33□□□□□ -0.6
SEC22C-209ENST00000449617 POLR2J3Q9H1A7 115 aaKnown RBP11.33□□□□□ -0.6
SEC22C-209ENST00000449617 PLK3Q9H4B4 646 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 ZNF442Q9H7R0 627 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 C20orf141Q9NUB4 165 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 ZNF224Q9NZL3 707 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 FKBP7Q9Y680 259 aa11.33□□□□□ -0.6
SEC22C-209ENST00000449617 BLOC1S5-TXNDC5H3BN57 136 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 hCG_2039718K7EN88 272 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 PGA4P0DJD7 388 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 PGA3P0DJD8 388 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 COX4I1P13073 169 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 SLC25A16P16260 332 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 ZNF14P17017 642 aaPredicted RBP11.32□□□□□ -0.6
SEC22C-209ENST00000449617 GIPRP48546 466 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 PTDSS1P48651 473 aaKnown RBP11.32□□□□□ -0.6
SEC22C-209ENST00000449617 RPL18Q07020 188 aaKnown RBP11.32□□□□□ -0.6
SEC22C-209ENST00000449617 SNTB2Q13425 540 aaKnown RBP11.32□□□□□ -0.6
SEC22C-209ENST00000449617 KRT80Q6KB66 452 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 LRFN4Q6PJG9 635 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 ARPINQ7Z6K5 226 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 SVOPLQ8N434 492 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 IL17RDQ8NFM7 739 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 RP9Q8TA86 221 aaKnown RBP11.32□□□□□ -0.6
SEC22C-209ENST00000449617 TMEM239Q8WW34 195 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 SGTBQ96EQ0 304 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 ZNF75AQ96N20 296 aa11.32□□□□□ -0.6
SEC22C-209ENST00000449617 VRK1Q99986 396 aaPredicted RBP11.32□□□□□ -0.6
SEC22C-209ENST00000449617 TLX2O43763 284 aaPredicted RBP11.31□□□□□ -0.6
SEC22C-209ENST00000449617 PIP5K1CO60331 668 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 CCDC22O60826 627 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 UBL3O95164 117 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 RAB36O95755 333 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 BCL10O95999 233 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 IGHG1P01857 330 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 F13BP05160 661 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 THRBP10828 461 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 FUT1P19526 365 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 NPR2P20594 1047 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 AQP2P41181 271 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 PPOXP50336 477 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 SLC7A2P52569 658 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 LIPEQ05469 1076 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 RUNX1T1Q06455 604 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 LOXL1Q08397 574 aaPredicted RBP11.31□□□□□ -0.6
SEC22C-209ENST00000449617 DAG1Q14118 895 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 TMEM249Q2WGJ8 235 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 SPATA21Q7Z572 469 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 VTCN1Q7Z7D3 282 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 SLC15A3Q8IY34 581 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 SLC22A24Q8N4F4 322 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 TNFRSF13CQ96RJ3 184 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 YAE1D1Q9NRH1 226 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 TMEM38BQ9NVV0 291 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 ADAM21Q9UKJ8 722 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 AP3M1Q9Y2T2 418 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 MED31Q9Y3C7 131 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 ATRQ13535 2644 aa11.31□□□□□ -0.6
SEC22C-209ENST00000449617 A0A1W2PRG6 482 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 KIAA1324LA8MWY0 1029 aaPredicted RBP11.3□□□□□ -0.6
SEC22C-209ENST00000449617 MCIDASD6RGH6 385 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 NME4O00746 187 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 DHHO43323 396 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 CRLF1O75462 422 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 IGF2P01344 180 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 QDPRP09417 244 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 PATE4P0C8F1 98 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 NR4A1P22736 598 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 PDLIM4P50479 330 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 CLRN1P58418 232 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 RAB1AP62820 205 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 SELENOWP63302 87 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 CARTPTQ16568 116 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 PIWIL3Q7Z3Z3 882 aaKnown RBP11.3□□□□□ -0.6
SEC22C-209ENST00000449617 TREML1Q86YW5 311 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 SKA3Q8IX90 412 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 CDK20Q8IZL9 346 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 NOXO1Q8NFA2 376 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 MOSPD2Q8NHP6 518 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 FGFBP3Q8TAT2 258 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 ASB10Q8WXI3 467 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 LZICQ8WZA0 190 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 PRRC1Q96M27 445 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 ZNF347Q96SE7 839 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 DENND2DQ9H6A0 471 aaPredicted RBP11.3□□□□□ -0.6
SEC22C-209ENST00000449617 INIPQ9NRY2 104 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms