RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 MCIDASD6RGH6 385 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 TBX6O95947 436 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 CH25HO95992 272 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 LAMP2P13473 410 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 DCTDP32321 178 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 MPPED2Q15777 294 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 PRPF38BQ5VTL8 546 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 TBC1D3GQ6DHY5 549 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 ZNF620Q6ZNG0 422 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 CPOQ8IVL8 374 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 CMTM4Q8IZR5 234 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 OR4A4PQ8NGN8 299 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 ABHD4Q8TB40 342 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 SUSD6Q92537 303 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 FGF14Q92915 247 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 POM121Q96HA1 1249 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 S1PR5Q9H228 398 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 GLIPR2Q9H4G4 154 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 ACKR4Q9NPB9 350 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 FAM96BQ9Y3D0 163 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 MYO10Q9HD67 2058 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 A0A1W2PPK0 400 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 GPR89AB7ZAQ6 455 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 GPR89BP0CG08 455 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 KIR2DL1P43626 348 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 NKAPLQ5M9Q1 402 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 ADAM5Q6NVV9 412 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 ZNF511Q8NB15 262 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 NUP43Q8NFH3 380 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 BRIX1Q8TDN6 353 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 CHRDQ9H2X0 955 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 TMEM27Q9HBJ8 222 aa12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 MRPS30Q9NP92 439 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 RCC2Q9P258 522 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-204ENST00000449372 ANKRD61A6NGH8 418 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 A6NLC8 198 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 F5H0A9 414 aaPredicted RBP12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 K7EQS6 105 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 RTCAO00442 366 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 MBTPS2O43462 519 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 YIF1AO95070 293 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 HIST1H1BP16401 226 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 TBXA2RP21731 343 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 NRG3P56975 720 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 CDK3Q00526 305 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 SMAD4Q13485 552 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 CSRP2Q16527 193 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 NDUFAF6Q330K2 333 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 SLC36A1Q7Z2H8 476 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 C3orf49Q96BT1 292 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 TBX5Q99593 518 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 NRIP2Q9BQI9 281 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 RPP25Q9BUL9 199 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 AK1P00568 194 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 HMGN2P05204 90 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 HCKP08631 526 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 TEAD1P28347 426 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 ZNF239Q16600 458 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 LIN54Q6MZP7 749 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 PARM1Q6UWI2 310 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 CARFQ8N187 725 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 BEST3Q8N1M1 668 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 LRFN5Q96NI6 719 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 MRPL37Q9BZE1 423 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 NKX2-4Q9H2Z4 354 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 RPS10P5Q9NQ39 176 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 PLXND1Q9Y4D7 1925 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 ANKRD20A5PA0PJZ0 165 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 IGLON5A6NGN9 336 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 OR2AT4A6NND4 320 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 PRSS47A8MTI9 375 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 TSTD3H0UI37 97 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 NARSO43776 548 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 OR2F2O95006 317 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 TYRP1P17643 537 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 OR2F1Q13607 317 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 METRNLQ641Q3 311 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 OLFML2AQ68BL7 652 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 NRMQ8IXM6 262 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 ZNF740Q8NDX6 193 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 CCDC54Q8NEL0 328 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 TEAD3Q99594 435 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 CNIH4Q9P003 139 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 TP53TG5Q9Y2B4 290 aa12.3□□□□□ -0.44
SYNGAP1-204ENST00000449372 TRPM6Q9BX84 2022 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 TRAV1-2A0A0B4J238 106 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 TMEM272A0A1B0GTI8 110 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 RBBP9O75884 186 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 PCDH8O95206 1070 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 IFNA10P01566 189 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 ASGR2P07307 311 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 ADH6P28332 368 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 NRROSQ86YC3 692 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 OR5K2Q8NHB8 316 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 LGALS14Q8TCE9 139 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 THRSPQ92748 146 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 TRMT61BQ9BVS5 477 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 PRO1933Q9H354 126 aa12.29□□□□□ -0.44
SYNGAP1-204ENST00000449372 MBNL1Q9NR56 388 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms