RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 C5orf51A6NDU8 294 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 F3P13726 295 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 ACTBP60709 375 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 ACTG1P63261 375 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 NR0B2Q15466 257 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 HYAL4Q2M3T9 481 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 ZNF750Q32MQ0 723 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 ZNF585AQ6P3V2 769 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 GLB1LQ6UWU2 654 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 RHOUQ7L0Q8 258 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 KCTD9Q7L273 389 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 AMER3Q8N944 861 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 OR52E2Q8NGJ4 325 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 TIFAQ96CG3 184 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 IP6K3Q96PC2 410 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 FARSAQ9Y285 508 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 TIMM10BQ9Y5J6 103 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 TEX13DA0A0J9YY54 714 aaPredicted RBP8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 C13orf42A0A1B0GVH6 325 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 C9JQL5 133 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 MBTPS2O43462 519 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 CSN2P05814 226 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 HOXB5P09067 269 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 C8orf89P0DMQ9 161 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 ST6GAL1P15907 406 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 HOXA5P20719 270 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 GSK3AP49840 483 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 CLDN2P57739 230 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 HTRA3P83110 453 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 CCINQ13939 588 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 KIAA0141Q14154 515 aaPredicted RBP8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 NKAIN2Q5VXU1 208 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 ANKRD16Q6P6B7 361 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 OR51D1Q8NGF3 324 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 BPIFA2Q96DR5 249 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 SAT2Q96F10 170 aaPredicted RBP8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 PRSS27Q9BQR3 290 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 C20orf24Q9BUV8 137 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 ZNF350Q9GZX5 532 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 RGCCQ9H4X1 137 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 SIGLEC7Q9Y286 467 aa8.6□□□□□ -1.03
SYNPO2-204ENST00000448416 A0A087X0M5 115 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 A0A1B0GX30 115 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 TSPAN11A1L157 253 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 TCAPO15273 167 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 CTAG2O75638 210 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 RPP14O95059 124 aaKnown RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 FGF19O95750 216 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 MELTFP08582 738 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 MAOAP21397 527 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 PSMB6P28072 239 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 EFNB2P52799 333 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 HSD11B1LQ7Z5J1 315 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 OR56A1Q8NGH5 318 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 CASTOR1Q8WTX7 329 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 LGR4Q9BXB1 951 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 ATG5Q9H1Y0 275 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 PRDM13Q9H4Q3 707 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 TUBA4BQ9H853 241 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 PPP1R14DQ9NXH3 145 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 ZNF223Q9UK11 482 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 WIF1Q9Y5W5 379 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 FEZF1A0PJY2 475 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 H7C1Q1 480 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 TMEM189-UBE2V1I3L0A0 370 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 NFKBIEO00221 500 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 VNN2O95498 520 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 WNT11O96014 354 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 ARG1P05089 322 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 DDTP30046 118 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 CDX1P47902 265 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 NANOS3P60323 173 aaKnown RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 RNF4P78317 190 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 SMAD3P84022 425 aaKnown RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 ZNF239Q16600 458 aaKnown RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 RSPO2Q6UXX9 243 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 WDR88Q6ZMY6 472 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 OR2L13Q8N349 312 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 PAQR4Q8N4S7 273 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 OR4K13Q8NH42 304 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 SECTM1Q8WVN6 248 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 RGP1Q92546 391 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 FBXO24O75426 580 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 MED6O75586 246 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 CD5P06127 495 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 HIST1H1BP16401 226 aaKnown RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 SSR2P43308 183 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 PDX1P52945 283 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 NDUFA6P56556 154 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 NSUN5P2Q63ZY6 315 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 CYB5R2Q6BCY4 276 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 TMEM64Q6YI46 380 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 RANBP3LQ86VV4 465 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 FAM129CQ86XR2 697 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 ELF4Q99607 663 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 CHST5Q9GZS9 411 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 LHX9Q9NQ69 397 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 CXXC1Q9P0U4 656 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 PLAGL1Q9UM63 463 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 ZNF443Q9Y2A4 671 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms