RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 TSFMP43897 325 aaKnown RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 KIAA0141Q14154 515 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 IHHQ14623 411 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 AARDQ4LEZ3 155 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 OR4Q3Q8NH05 313 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 NANPQ8TBE9 248 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 MITD1Q8WV92 249 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 RNF170Q96K19 258 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TMEM43Q9BTV4 400 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 OBP2BQ9NPH6 170 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 ACER3Q9NUN7 267 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TAAR2Q9P1P5 351 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 BRWD1Q9NSI6 2320 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TMED7-TICAM2A0A0A6YYA0 188 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 ADAM12O43184 909 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 CLDN1O95832 211 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 LGI1O95970 557 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 FOLR1P15328 257 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 NPPBP16860 134 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 ANXA7P20073 488 aaKnown RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 PTGER4P35408 488 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TNFRSF4P43489 277 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 RACK1P63244 317 aaKnown RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 PDZK1IP1Q13113 114 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 STK11Q15831 433 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 SOWAHCQ53LP3 525 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 PAN3Q58A45 887 aaKnown RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 ABHD17CQ6PCB6 329 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TMEFF1Q8IYR6 380 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 PLPP7Q8NBV4 271 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 SLC16A11Q8NCK7 471 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 KLHDC9Q8NEP7 349 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 OR10Z1Q8NGY1 313 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 OR1E3Q8WZA6 343 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 FGGYQ96C11 551 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TEAD3Q99594 435 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 PDCD1LG2Q9BQ51 273 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 GABARAPL1Q9H0R8 117 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 RNF167Q9H6Y7 350 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 NIT2Q9NQR4 276 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF629Q9UEG4 869 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 SLC23A2Q9UGH3 650 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TMED7Q9Y3B3 224 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 NUDT19A8MXV4 375 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 BHLHE40O14503 412 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 PHF1O43189 567 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 DFFBO76075 338 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 HLA-HP01893 362 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 CD63P08962 238 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 SLC35E2P0CK97 266 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 CALCBP10092 127 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 ITGB8P26012 769 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 CLDN17P56750 224 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 CDC20Q12834 499 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 PXDC1Q5TGL8 231 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 FAM199XQ6PEV8 388 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 OGFOD3Q6PK18 319 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 KANSL1Q7Z3B3 1105 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 PRSS35Q8N3Z0 413 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 LRRC18Q8N456 261 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 KCNRGQ8N5I3 272 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 C14orf79Q96F83 325 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 PDXPQ96GD0 296 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 TOE1Q96GM8 510 aaKnown RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF845Q96IR2 970 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 CDCA3Q99618 268 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 ABHD6Q9BV23 337 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 NKX6-2Q9C056 277 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 ADAM19Q9H013 955 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 EXOSC3Q9NQT5 275 aaKnown RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 NDUFB11Q9NX14 153 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 PPT2Q9UMR5 302 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 EXO1Q9UQ84 846 aaKnown RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 RP1L1Q8IWN7 2480 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 IGLV3-10A0A075B6K4 115 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 CYB5BO43169 146 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 OR2F2O95006 317 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 PMP2P02689 132 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 RAF1P04049 648 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 HLA-DOBP13765 273 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 ARNTP27540 789 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 SLC6A11P48066 632 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 NPY4RP50391 375 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 FLI1Q01543 452 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 OR2F1Q13607 317 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 TIGD3Q6B0B8 471 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 AAED1Q7RTV5 226 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 LINC00346Q8IVM7 164 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 DMBX1Q8NFW5 382 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 ST8SIA4Q92187 359 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 FGF13Q92913 245 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 BSCL2Q96G97 398 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 LCORQ96JN0 433 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 Q96M85 177 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 SLC46A1Q96NT5 459 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 UQCC2Q9BRT2 126 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 PRR14Q9BWN1 585 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 GABARAPL3Q9BY60 117 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 ARV1Q9H2C2 271 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 SCPEP1Q9HB40 452 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms