RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 CATSPER3Q86XQ3 398 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 PLCZ1Q86YW0 608 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 PRR22Q8IZ63 422 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 SNX31Q8N9S9 440 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 LMO3Q8TAP4 145 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 ZNF564Q8TBZ8 553 aaPredicted RBP3.09□□□□□ -1.91
PMS1-216ENST00000447734 ACOT11Q8WXI4 607 aaPredicted RBP3.09□□□□□ -1.91
PMS1-216ENST00000447734 BAALCQ8WXS3 180 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 TFGQ92734 400 aaPredicted RBP3.09□□□□□ -1.91
PMS1-216ENST00000447734 GTF2H4Q92759 462 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 TNFRSF14Q92956 283 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 DOCK7Q96N67 2140 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 KCTD14Q9BQ13 255 aaPredicted RBP3.09□□□□□ -1.91
PMS1-216ENST00000447734 OSBPL10Q9BXB5 764 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 TUBB1Q9H4B7 451 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 CWH43Q9H720 699 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 FOLH1BQ9HBA9 442 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 LY9Q9HBG7 655 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 EML4Q9HC35 981 aaKnown RBP3.09□□□□□ -1.91
PMS1-216ENST00000447734 CD209Q9NNX6 404 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 ACP6Q9NPH0 428 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 OR2S2Q9NQN1 319 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 MCUBQ9NWR8 336 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 THAP10Q9P2Z0 257 aaPredicted RBP3.09□□□□□ -1.91
PMS1-216ENST00000447734 ING4Q9UNL4 249 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 V9GYY9 64 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 IGLV3-22A0A075B6J6 115 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 GLYATL1P3A0A0U1RQE8 302 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 C1orf232A0A0U1RR37 186 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 SMIM28A0A1B0GU29 152 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 A0A1B0GW55 424 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 TSPAN11A1L157 253 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 MEIOCA2RUB1 952 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 GOLGA8RI6L899 631 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 TOR1AO14656 332 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 PRMT5O14744 637 aaPredicted RBP3.08□□□□□ -1.92
PMS1-216ENST00000447734 SNAP91O60641 907 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 MPDU1O75352 247 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 CLDN11O75508 207 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 PLEKHA8P1O95397 391 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 LSM8O95777 96 aaKnown RBP3.08□□□□□ -1.92
PMS1-216ENST00000447734 GLAP06280 429 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 DUX4L2P0CJ85 424 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 DUX4L3P0CJ86 424 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 DUX4L4P0CJ87 422 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 DUX4L5P0CJ88 424 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 DUX4L6P0CJ89 424 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 DUX4L7P0CJ90 424 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 PLA2G2AP14555 144 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 HMGCLP35914 325 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 STXBP1P61764 594 aaKnown RBP3.08□□□□□ -1.92
PMS1-216ENST00000447734 ABRAXAS2Q15018 415 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 PAGE2BQ5JRK9 111 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 MARCH8Q5T0T0 291 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 ZNF691Q5VV52 312 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 UFSP1Q6NVU6 142 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 DUX4L9Q6RFH8 374 aaPredicted RBP3.08□□□□□ -1.92
PMS1-216ENST00000447734 Q6ZN92 141 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 ACOT7LQ6ZUV0 252 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 LRRC49Q8IUZ0 686 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 C9orf40Q8IXQ3 194 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 PIANPQ8IYJ0 282 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 SPAG16Q8N0X2 631 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 PRELID2Q8N945 189 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 CYB561A3Q8NBI2 242 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 NOXO1Q8NFA2 376 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 OR6N2Q8NGY6 317 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 LGALS14Q8TCE9 139 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 ACER1Q8TDN7 264 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 TFB1MQ8WVM0 346 aaKnown RBP3.08□□□□□ -1.92
PMS1-216ENST00000447734 C17orf50Q8WW18 174 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 TMEM239Q8WW34 195 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 NDRG1Q92597 394 aaKnown RBP3.08□□□□□ -1.92
PMS1-216ENST00000447734 CDKL2Q92772 493 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 SMARCD2Q92925 531 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 ALS2CR12Q96Q35 445 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 KLHDC3Q9BQ90 382 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 SYT15Q9BQS2 421 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 SLC29A3Q9BZD2 475 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 ULBP2Q9BZM5 246 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 MMP28Q9H239 520 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 C1orf198Q9H425 327 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 SIAEQ9HAT2 523 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 QPCTLQ9NXS2 382 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 NKIRAS1Q9NYS0 192 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 SLC17A7Q9P2U7 560 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 DUX4Q9UBX2 424 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 ZNF282Q9UDV7 671 aaPredicted RBP3.08□□□□□ -1.92
PMS1-216ENST00000447734 MRM2Q9UI43 246 aaKnown RBP3.08□□□□□ -1.92
PMS1-216ENST00000447734 GOLT1BQ9Y3E0 138 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 CBY1Q9Y3M2 126 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 PYGO1Q9Y3Y4 419 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 SBNO1A3KN83 1393 aa3.08□□□□□ -1.92
PMS1-216ENST00000447734 LYRM9A8MSI8 78 aa3.07□□□□□ -1.92
PMS1-216ENST00000447734 ZNF487B1APH4 448 aa3.07□□□□□ -1.92
PMS1-216ENST00000447734 ERVV-2B6SEH9 535 aa3.07□□□□□ -1.92
PMS1-216ENST00000447734 RNASEK-C17orf49H0YIS7 233 aa3.07□□□□□ -1.92
PMS1-216ENST00000447734 K7ENP7 123 aa3.07□□□□□ -1.92
PMS1-216ENST00000447734 SLC17A2O00624 439 aa3.07□□□□□ -1.92
PMS1-216ENST00000447734 MRPS12O15235 138 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms