RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 RNH1P13489 461 aaKnown RBP17.53■□□□□ 0.4
HMGA1-205ENST00000447654 SPINT3P49223 89 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 PRKXP51817 358 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 SKP2Q13309 424 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 ELAVL1Q15717 326 aaKnown RBP17.53■□□□□ 0.4
HMGA1-205ENST00000447654 ZNF77Q15935 545 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 POM121L1PQ3SYA9 428 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 RPTNQ6XPR3 784 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 OR52L1Q8NGH7 329 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 OR51S1Q8NGJ8 323 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 MRGPRX3Q96LB0 322 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 SAMD8Q96LT4 415 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 RSRP1Q9BUV0 290 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 POTEKPQ9BYX7 375 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 LMAN1LQ9HAT1 526 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 SIRT3Q9NTG7 399 aaPredicted RBP17.53■□□□□ 0.4
HMGA1-205ENST00000447654 SLC25A13Q9UJS0 675 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 DNAH14Q0VDD8 3507 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 TRBV6-7A0A0A0MS04 114 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 A6NLC8 198 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 KLK1P06870 262 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 CTSLP07711 333 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 VAMP1P23763 118 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 CD34P28906 385 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 DVL1P1P54792 670 aaPredicted RBP17.52■□□□□ 0.4
HMGA1-205ENST00000447654 GAS6Q14393 721 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 MLC1Q15049 377 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 HSD11B1LQ7Z5J1 315 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 DPPA2Q7Z7J5 298 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 PNLDC1Q8NA58 520 aaKnown RBP17.52■□□□□ 0.4
HMGA1-205ENST00000447654 CDC6Q99741 560 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 SOX7Q9BT81 388 aa17.52■□□□□ 0.4
HMGA1-205ENST00000447654 A0A1W2PPK0 400 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 SEC14L6B5MCN3 397 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 FAM157AC9JC47 383 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 PAPLNO95428 1278 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 PPP1R3DO95685 299 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 ADH7P40394 386 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 BUD31P41223 144 aaPredicted RBP17.52■□□□□ 0.39
HMGA1-205ENST00000447654 SLC6A9P48067 706 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 NUTF2P61970 127 aaKnown RBP17.52■□□□□ 0.39
HMGA1-205ENST00000447654 RAB1AP62820 205 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 SIRPAP78324 504 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 NCMAPQ5T1S8 102 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 GDPD4Q6W3E5 623 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 DPPA4Q7L190 304 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 GRASPQ7Z6J2 395 aaPredicted RBP17.52■□□□□ 0.39
HMGA1-205ENST00000447654 SNX33Q8WV41 574 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 ARMC5Q96C12 935 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 MED8Q96G25 268 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 SLC35G5Q96KT7 338 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 OR14A2Q96R54 314 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 UNKLQ9H9P5 680 aaKnown RBP17.52■□□□□ 0.39
HMGA1-205ENST00000447654 CMC2Q9NRP2 79 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 PISDQ9UG56 409 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 KCNIP3Q9Y2W7 256 aa17.52■□□□□ 0.39
HMGA1-205ENST00000447654 ADAM10O14672 748 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 B4GALT2O60909 372 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 LEFTY1O75610 366 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 F10P00742 488 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 CRYABP02511 175 aaKnown RBP17.51■□□□□ 0.39
HMGA1-205ENST00000447654 ITGA5P08648 1049 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 C5AR1P21730 350 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 MPIP34949 423 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 KHKP50053 298 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 PCBP4P57723 403 aaKnown RBP17.51■□□□□ 0.39
HMGA1-205ENST00000447654 HSD11B2P80365 405 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 BEX5Q5H9J7 111 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 EIF5AL1Q6IS14 154 aaKnown RBP17.51■□□□□ 0.39
HMGA1-205ENST00000447654 LCTLQ6UWM7 567 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 HIST2H3AQ71DI3 136 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 GALNT16Q8N428 558 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 PAQR4Q8N4S7 273 aaPredicted RBP17.51■□□□□ 0.39
HMGA1-205ENST00000447654 OR1J2Q8NGS2 313 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 OR10R2Q8NGX6 335 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 NCDNQ9UBB6 729 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 SLC13A4Q9UKG4 626 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 FAM96BQ9Y3D0 163 aa17.51■□□□□ 0.39
HMGA1-205ENST00000447654 FAM221BA6H8Z2 402 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 SLCO2B1O94956 709 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 MYOGP15173 224 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 NME1P15531 152 aaKnown RBP17.5■□□□□ 0.39
HMGA1-205ENST00000447654 MAOAP21397 527 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 SLC26A5P58743 744 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 CCINQ13939 588 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 RHEBQ15382 184 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 KRBOX4Q5JUW0 171 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 TMEM240Q5SV17 173 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 PIP5KL1Q5T9C9 394 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 UNQ6126/PRO20091Q6UXV3 157 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 Q6ZVL8 140 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 MAMDC2Q7Z304 686 aaPredicted RBP17.5■□□□□ 0.39
HMGA1-205ENST00000447654 CPNE2Q96FN4 548 aaPredicted RBP17.5■□□□□ 0.39
HMGA1-205ENST00000447654 SULT4A1Q9BR01 284 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 CHST6Q9GZX3 395 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 BCO1Q9HAY6 547 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 NOX4Q9NPH5 578 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 AHSPQ9NZD4 102 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 BHLHE40O14503 412 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 FCGR3AP08637 254 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms