RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	GDI1	P31150	447 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	RPS11	P62280	158 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	TNFRSF17	Q02223	184 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	CHAF1B	Q13112	559 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	ARHGAP19	Q14CB8	494 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	ZIC1	Q15915	447 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	MEP1B	Q16820	701 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	LIPN	Q5VXI9	398 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	SLITRK4	Q8IW52	837 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	OR2L8	Q8NGY9	312 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	SLC25A28	Q96A46	364 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	MAP3K3	Q99759	626 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	TBX21	Q9UL17	535 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	DAPP1	Q9UN19	280 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	C2orf72	A6NCS6	295 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	ARL6IP5	O75915	188 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	F12	P00748	615 aa	Predicted RBP	11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	NFYA	P23511	347 aa	Predicted RBP	11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	CCKBR	P32239	447 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	H2BFS	P57053	126 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	SEZ6L2	Q6UXD5	910 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	IL17RC	Q8NAC3	791 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	TMIE	Q8NEW7	156 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	OR1M1	Q8NGA1	313 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	SPPL3	Q8TCT6	385 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	RGP1	Q92546	391 aa	Predicted RBP	11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	S100A16	Q96FQ6	103 aa	Known RBP	11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	MOGAT1	Q96PD6	335 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	GAL3ST4	Q96RP7	486 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	SSX3	Q99909	188 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	EXO5	Q9H790	373 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	TMEM185B	Q9H7F4	350 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	ISYNA1	Q9NPH2	558 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	PRR13	Q9NZ81	148 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	PMS2P1	A4D2B8	440 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	FITM1	A5D6W6	292 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	IFITM5	A6NNB3	132 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312		J3QRE1	110 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	OIP5	O43482	229 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	WISP1	O95388	367 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	SLC6A6	P31641	620 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	CDKN2A	P42771	156 aa	Known RBP	11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	CTXN1	P60606	82 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	RNF4	P78317	190 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	GPR18	Q14330	331 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	CBLN3	Q6UW01	205 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	MRGPRE	Q86SM8	312 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	ETFBKMT	Q8IXQ9	262 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	YAF2	Q8IY57	180 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	TMEM106A	Q96A25	262 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	RERG	Q96A58	199 aa	Predicted RBP	11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	SMIM19	Q96E16	107 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	LURAP1	Q96LR2	239 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	AMELY	Q99218	206 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	NRIP3	Q9NQ35	241 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	HRASLS2	Q9NWW9	162 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	LYAR	Q9NX58	379 aa	Known RBP	11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	ANKRD10	Q9NXR5	420 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	KLHL9	Q9P2J3	617 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	PLEKHA6	Q9Y2H5	1048 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312		V9GY05	133 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	WDFY4	Q6ZS81	3184 aa		11.44	□□□□□ -0.58
DDR1-238	ENST00000446312	METTL12	A8MUP2	240 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	CREBL2	O60519	120 aa	Predicted RBP	11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	NFATC1	O95644	943 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	APBB3	O95704	486 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	TGM6	O95932	706 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	CSTA	P01040	98 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	ZNF28	P17035	718 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	ADRA2C	P18825	462 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	PITPNA	Q00169	270 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	TAF13	Q15543	124 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	PRAMEF17	Q5VTA0	474 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	PHOSPHO1	Q8TCT1	267 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	BRIX1	Q8TDN6	353 aa	Known RBP	11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	SMIM4	Q8WVI0	70 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	SPSB2	Q99619	263 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	APOO	Q9BUR5	198 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	GPN3	Q9UHW5	284 aa	Predicted RBP	11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	POMT2	Q9UKY4	750 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	CD3D	P04234	171 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	DBI	P07108	87 aa	Known RBP	11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	SPI1	P17947	270 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	BPIFB3	P59826	476 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	SNRPE	P62304	92 aa	Known RBP	11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	ADAMTSL4	Q6UY14	1074 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	DPPA2	Q7Z7J5	298 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	OR4S1	Q8NGB4	309 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	SFXN5	Q8TD22	340 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	ZNF75A	Q96N20	296 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	FAM83C	Q9BQN1	747 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	ALG12	Q9BV10	488 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	SYT4	Q9H2B2	425 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	TMEM231	Q9H6L2	316 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	PIPOX	Q9P0Z9	390 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	MRTO4	Q9UKD2	239 aa	Known RBP	11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	ADAM29	Q9UKF5	820 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	CAMK2A	Q9UQM7	478 aa		11.43	□□□□□ -0.58
DDR1-238	ENST00000446312	FKTN	O75072	461 aa		11.43	□□□□□ -0.58

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