RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 C1orf105O95561 183 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 H2AFB1P0C5Y9 115 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 SQSTM1Q13501 440 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 ZNF79Q15937 498 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 LAS2Q8IYD9 372 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 MMP21Q8N119 569 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 SH3RF2Q8TEC5 729 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 GLYATL2Q8WU03 294 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 SLC17A5Q9NRA2 495 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 DUSP22Q9NRW4 184 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 CHRNA9Q9UGM1 479 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 STRAPQ9Y3F4 350 aaKnown RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 FGF19O95750 216 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 C5AR1P21730 350 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 WDR88Q6ZMY6 472 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 POC1BQ8TC44 478 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 AUNIPQ9H7T9 357 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 PIGBOS1A0A0B4J2F0 54 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 A8MXE2 369 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 CFDP00746 253 aaPredicted RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 ACVR1Q04771 509 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 DEFB134Q4QY38 66 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 TPGS2Q68CL5 300 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 SPIN2AQ99865 258 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 SPIN2BQ9BPZ2 258 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 C16orf70Q9BSU1 422 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 KLK11Q9UBX7 282 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 SONP18583 2426 aaKnown RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 DOPEY1Q5JWR5 2465 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 A8MXK9 166 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 OR1S2Q8NGQ3 325 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 SLC22A18Q96BI1 424 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 C2orf50Q96LR7 162 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 LYRM2Q9NU23 88 aaPredicted RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 PLEKHJ1Q9NW61 149 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 IL36AQ9UHA7 158 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 AKT2P31751 481 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 AGFG1P52594 562 aaKnown RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 RPL23AP62750 156 aaKnown RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 ZNF619Q8N2I2 560 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 BRI3BPQ8WY22 251 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 SCLYQ96I15 445 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 CXCL16Q9H2A7 254 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMG1-202ENST00000446231 EIF3GO75821 320 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMG1-202ENST00000446231 CYHR1Q6ZMK1 362 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 CDRT4Q8N9R6 151 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 INTS12Q96CB8 462 aaKnown RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 GLIPR2Q9H4G4 154 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 DEC1Q9P2X7 70 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 ICKQ9UPZ9 632 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 ZNF157P51786 506 aaPredicted RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 NHLH2Q02577 135 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 TLE3Q04726 772 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 HEPACAM2A8MVW5 462 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 CHRM4P08173 479 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 PPM1AP35813 382 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 ZNF41P51814 821 aaPredicted RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 LRRTM4Q86VH4 590 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 ZNF558Q96NG5 402 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 MMP24Q9Y5R2 645 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 CLEC3AO75596 197 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 TIMP2P16035 220 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 GZMMP51124 257 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 LYG2Q86SG7 212 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 ZNF511Q8NB15 262 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 SMG9Q9H0W8 520 aaKnown RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 EHFQ9NZC4 300 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 CXXC1Q9P0U4 656 aaPredicted RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 ADAM29Q9UKF5 820 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 XRCC3O43542 346 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 QDPRP09417 244 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 RPA2P15927 270 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 ZNF626Q68DY1 528 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 ETFRF1Q6IPR1 90 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 BTF3L4Q96K17 158 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 TEX101Q9BY14 249 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 TAAR2Q9P1P5 351 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 HEATR5AQ86XA9 2040 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 RHOP08100 348 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 AVPR2P30518 371 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 SNCAP37840 140 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 PFN3P60673 137 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 RIN1Q13671 783 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 C11orf87Q6NUJ2 197 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 SLC39A7Q92504 469 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 PIGQQ9BRB3 760 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 HINT3Q9NQE9 182 aaKnown RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 FTSJ1Q9UET6 329 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 CCSO14618 274 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 MBTPS2O43462 519 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 HTD2P86397 168 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 NPAS4Q8IUM7 802 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 OVCA2Q8WZ82 227 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 TM4SF18Q96CE8 201 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 BPNT1O95861 308 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 PNPP00491 289 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 HIST1H1TP22492 207 aaPredicted RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 ARL6IP1Q15041 203 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 VAMP3Q15836 100 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms