RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PTDSS1P48651 473 aaKnown RBP17.42■□□□□ 0.38
LRCH3-208ENST00000443727 UGT2B15P54855 530 aa17.42■□□□□ 0.38
LRCH3-208ENST00000443727 LIPEQ05469 1076 aa17.42■□□□□ 0.38
LRCH3-208ENST00000443727 ADIPOQQ15848 244 aa17.42■□□□□ 0.38
LRCH3-208ENST00000443727 NUP37Q8NFH4 326 aa17.42■□□□□ 0.38
LRCH3-208ENST00000443727 TMEM54Q969K7 222 aa17.42■□□□□ 0.38
LRCH3-208ENST00000443727 SLC25A44Q96H78 314 aaPredicted RBP17.42■□□□□ 0.38
LRCH3-208ENST00000443727 EFCAB1Q9HAE3 211 aa17.42■□□□□ 0.38
LRCH3-208ENST00000443727 MED31Q9Y3C7 131 aa17.42■□□□□ 0.38
LRCH3-208ENST00000443727 ENTPD5O75356 428 aa17.41■□□□□ 0.38
LRCH3-208ENST00000443727 F12P00748 615 aaPredicted RBP17.41■□□□□ 0.38
LRCH3-208ENST00000443727 CSF3P09919 207 aa17.41■□□□□ 0.38
LRCH3-208ENST00000443727 THRBP10828 461 aa17.41■□□□□ 0.38
LRCH3-208ENST00000443727 CLRN1P58418 232 aa17.41■□□□□ 0.38
LRCH3-208ENST00000443727 SELENOWP63302 87 aa17.41■□□□□ 0.38
LRCH3-208ENST00000443727 HGFACQ04756 655 aa17.41■□□□□ 0.38
LRCH3-208ENST00000443727 ZNF627Q7L945 461 aa17.41■□□□□ 0.38
LRCH3-208ENST00000443727 SLC15A3Q8IY34 581 aa17.41■□□□□ 0.38
LRCH3-208ENST00000443727 OR10H5Q8NGA6 315 aa17.41■□□□□ 0.38
LRCH3-208ENST00000443727 HOPXQ9BPY8 73 aaPredicted RBP17.41■□□□□ 0.38
LRCH3-208ENST00000443727 B3GNT2Q9NY97 397 aa17.41■□□□□ 0.38
LRCH3-208ENST00000443727 ATP8B1O43520 1251 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 LY6HO94772 140 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 UBL3O95164 117 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 ZNF682O95780 498 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 IGHG1P01857 330 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 F13BP05160 661 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 SLC25A16P16260 332 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 NPR2P20594 1047 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 THBS4P35443 961 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 GIPRP48546 466 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 NUDT2P50583 147 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 SLC7A2P52569 658 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 RPL18Q07020 188 aaKnown RBP17.4■□□□□ 0.38
LRCH3-208ENST00000443727 ST3GAL3Q11203 375 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 DAG1Q14118 895 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 PIWIL3Q7Z3Z3 882 aaKnown RBP17.4■□□□□ 0.38
LRCH3-208ENST00000443727 HDDC2Q7Z4H3 204 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 SPATA21Q7Z572 469 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 MS4A3Q96HJ5 214 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 ELAC2Q9BQ52 826 aaKnown RBP17.4■□□□□ 0.38
LRCH3-208ENST00000443727 FAM107BQ9H098 131 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 DENND2DQ9H6A0 471 aaPredicted RBP17.4■□□□□ 0.38
LRCH3-208ENST00000443727 ZNF442Q9H7R0 627 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 NOX3Q9HBY0 568 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 INIPQ9NRY2 104 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 C20orf141Q9NUB4 165 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 FBXO9Q9UK97 447 aaPredicted RBP17.4■□□□□ 0.38
LRCH3-208ENST00000443727 SPEF1Q9Y4P9 236 aa17.4■□□□□ 0.38
LRCH3-208ENST00000443727 hCG_2039718K7EN88 272 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 CXCR6O00574 342 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 FARS2O95363 451 aaKnown RBP17.39■□□□□ 0.37
LRCH3-208ENST00000443727 IFNW1P05000 195 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 QDPRP09417 244 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 OR8G3PP0DMU2 310 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 LSP1P33241 339 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 AQP2P41181 271 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 DAP3P51398 398 aaKnown RBP17.39■□□□□ 0.37
LRCH3-208ENST00000443727 RAB1AP62820 205 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 KRTAP1-1Q07627 177 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 SNTB2Q13425 540 aaKnown RBP17.39■□□□□ 0.37
LRCH3-208ENST00000443727 EFNB3Q15768 340 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 CARTPTQ16568 116 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 KRT80Q6KB66 452 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 PRRC1Q96M27 445 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 SORCS2Q96PQ0 1159 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 YAE1D1Q9NRH1 226 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 GMPR2Q9P2T1 348 aaKnown RBP17.39■□□□□ 0.37
LRCH3-208ENST00000443727 FBXL3Q9UKT7 428 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 JMJD1CQ15652 2540 aa17.39■□□□□ 0.37
LRCH3-208ENST00000443727 NDUFAB1O14561 156 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 DHHO43323 396 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 IGF2P01344 180 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 ERCC1P07992 297 aaPredicted RBP17.38■□□□□ 0.37
LRCH3-208ENST00000443727 PGA4P0DJD7 388 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 PGA3P0DJD8 388 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 YAP1P46937 504 aaKnown RBP17.38■□□□□ 0.37
LRCH3-208ENST00000443727 GALK2Q01415 458 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 GKAP1Q5VSY0 366 aaPredicted RBP17.38■□□□□ 0.37
LRCH3-208ENST00000443727 LRFN4Q6PJG9 635 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 FKBP9P1Q75LS8 142 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 VTCN1Q7Z7D3 282 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 SVOPLQ8N434 492 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 SLC22A24Q8N4F4 322 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 ANKS4BQ8N8V4 417 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 SYT14Q8NB59 555 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 C10orf105Q8TEF2 133 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 CMTM5Q96DZ9 223 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 FNDC11Q9BVV2 318 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 RAB1BQ9H0U4 201 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 PLK3Q9H4B4 646 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 DYNLRB1Q9NP97 96 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 TMEM38BQ9NVV0 291 aa17.38■□□□□ 0.37
LRCH3-208ENST00000443727 NME4O00746 187 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 CD5LO43866 347 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 IFI30P13284 250 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 ZNF14P17017 642 aaPredicted RBP17.37■□□□□ 0.37
LRCH3-208ENST00000443727 NR4A1P22736 598 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 PDLIM4P50479 330 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 ZNF84P51523 738 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms