RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 OR2T2Q6IF00 324 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 DND1Q8IYX4 353 aaKnown RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 EDAQ92838 391 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 TNFRSF13CQ96RJ3 184 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 PTPN18Q99952 460 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 C20orf24Q9BUV8 137 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 UCK1Q9HA47 277 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 GAR1Q9NY12 217 aaKnown RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 HMGN2P05204 90 aaKnown RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 LAG3P18627 525 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 POU3F4P49335 361 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 ZXDCQ2QGD7 858 aaPredicted RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 Q499Y3 187 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 MRPL17Q9NRX2 175 aaKnown RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 MEIS3P1A6NDR6 274 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 VEGFDO43915 354 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 GABRR2P28476 465 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 CD80P33681 288 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 OR1D2P34982 312 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 STARD6P59095 220 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 OR4C11Q6IEV9 310 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 SAT2Q96F10 170 aaPredicted RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 SLC6A7Q99884 636 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 ALG12Q9BV10 488 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 OR52A5Q9H2C5 316 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 C7orf77A4D0Y5 90 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 PMS2P1A4D2B8 440 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 MEGF11A6BM72 1044 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TMEM189-UBE2V1I3L0A0 370 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 SULT2B1O00204 365 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TAGLN2P37802 199 aaKnown RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 EIF2B1Q14232 305 aaKnown RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 TMEM150AQ86TG1 271 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 ZNF514Q96K75 400 aaPredicted RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 SLC35B3Q9H1N7 401 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 PARPBPQ9NWS1 579 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 C2orf42Q9NWW7 574 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TNFSF18Q9UNG2 199 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 MOKQ9UQ07 419 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TRIP12Q14669 1992 aaPredicted RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 PSMD9O00233 223 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 STAC2Q6ZMT1 411 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 AMZ2Q86W34 360 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 DIO2Q92813 273 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 URADA6NGE7 173 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 ZFPL1O95159 310 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 PPP2CBP62714 309 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 PPP2CAP67775 309 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 GDF6Q6KF10 455 aaPredicted RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 ZNF836Q6ZNA1 936 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 PARGQ86W56 976 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TRAM1L1Q8N609 369 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 SLC30A7Q8NEW0 376 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 MKKSQ9NPJ1 570 aaPredicted RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 LAMP5Q9UJQ1 280 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TMEM212A6NML5 194 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 GRM6O15303 877 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 GIMD1P0DJR0 217 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 MAKP20794 623 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 NDUFS1P28331 727 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 DDTP30046 118 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 ACTR1AP61163 376 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 BTN3A2P78410 334 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 NHLH2Q02577 135 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 LMAN2Q12907 356 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 PWWP2BQ6NUJ5 590 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 SLC25A28Q96A46 364 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 ACKR4Q9NPB9 350 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 CKMP06732 381 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 GSK3AP49840 483 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 ATPAF1Q5TC12 328 aaPredicted RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 ANKRD16Q6P6B7 361 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TMEM239Q8WW34 195 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 WDR34Q96EX3 536 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 SPSB2Q99619 263 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 BCO1Q9HAY6 547 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 SAGE1Q9NXZ1 904 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 CLDND1Q9NY35 253 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 ZNF587BE7ETH6 402 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 HYAL3O43820 417 aaPredicted RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 AIFM1O95831 613 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 KLK3P07288 261 aaPredicted RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 FBXO45P0C2W1 286 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 AK4P27144 223 aaPredicted RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 PTGER1P34995 402 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 CAMLGP49069 296 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 RAB1AP62820 205 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 NAAAQ02083 359 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 ID2Q02363 134 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 CLINT1Q14677 625 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 FRMD1Q8N878 549 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 OR5AP2Q8NGF4 316 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 GLYATL1Q969I3 302 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 PTCHD1Q96NR3 888 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 PIGQQ9BRB3 760 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 CCSO14618 274 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 PDX1P52945 283 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TOMM20Q15388 145 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 FOXRED2Q8IWF2 684 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 OR2L5Q8NG80 312 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms