RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 B3GAT2Q9NPZ5 323 aa12.22□□□□□ -0.45
HMGN1-208ENST00000443046 TCF7L2Q9NQB0 619 aa12.22□□□□□ -0.45
HMGN1-208ENST00000443046 MED29Q9NX70 200 aa12.22□□□□□ -0.45
HMGN1-208ENST00000443046 SLCO1C1Q9NYB5 712 aa12.22□□□□□ -0.45
HMGN1-208ENST00000443046 ZNF69Q9UC07 566 aa12.22□□□□□ -0.45
HMGN1-208ENST00000443046 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-208ENST00000443046 IFT52Q9Y366 437 aa12.22□□□□□ -0.45
HMGN1-208ENST00000443046 ZNF500O60304 480 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-208ENST00000443046 BGLAPP02818 100 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 ALDOCP09972 364 aaKnown RBP12.21□□□□□ -0.45
HMGN1-208ENST00000443046 MYZAPP0CAP1 466 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 ETFAP13804 333 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 LBPP18428 481 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 ZFP36P26651 326 aaKnown RBP12.21□□□□□ -0.45
HMGN1-208ENST00000443046 LSP1P33241 339 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 SELENOVP59797 346 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 CAMK2DQ13557 499 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 WDR88Q6ZMY6 472 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 USP51Q70EK9 711 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 SCAIQ8N9R8 606 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 GTF3AQ92664 365 aaKnown RBP12.21□□□□□ -0.45
HMGN1-208ENST00000443046 TMEM19Q96HH6 336 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 SORT1Q99523 831 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 GPA33Q99795 319 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 ULBP2Q9BZM5 246 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 BCL2L10Q9HD36 194 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 PLEK2Q9NYT0 353 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 LGALS13Q9UHV8 139 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 HAO1Q9UJM8 370 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 LEF1Q9UJU2 399 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-208ENST00000443046 NUP50Q9UKX7 468 aa12.21□□□□□ -0.45
HMGN1-208ENST00000443046 POLR3KQ9Y2Y1 108 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-208ENST00000443046 NBEAL2Q6ZNJ1 2754 aa12.21□□□□□ -0.46
HMGN1-208ENST00000443046 TANC2Q9HCD6 1990 aa12.21□□□□□ -0.46
HMGN1-208ENST00000443046 A0A1B0GWA3 101 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 TYROBPO43914 113 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 SNAP29O95721 258 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 IGHV3-13P01766 116 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 FAM157BP0CG42 384 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 HTR2AP28223 471 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 NME5P56597 212 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 DSTNP60981 165 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 ERVS71-1P61550 626 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 LCN2P80188 198 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 HFEQ30201 348 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 PXKQ7Z7A4 578 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 TREML1Q86YW5 311 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 BCL6BQ8N143 479 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-208ENST00000443046 SLC22A24Q8N4F4 322 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 SLC30A7Q8NEW0 376 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 OR6N1Q8NGY5 312 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 SNX33Q8WV41 574 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 DNAJA4Q8WW22 397 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-208ENST00000443046 TMEM54Q969K7 222 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 TIMD4Q96H15 378 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 MEAF6Q9HAF1 191 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 DECR2Q9NUI1 292 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 AIG1Q9NVV5 245 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 RAP2CQ9Y3L5 183 aa12.2□□□□□ -0.46
HMGN1-208ENST00000443046 TLDC2A0PJX2 215 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 RFXANKO14593 260 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 UBOX5O94941 541 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 MFN2O95140 757 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 ZCCHC18P0CG32 403 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 CBLP22681 906 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 GCH1P30793 250 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 CRATP43155 626 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 RPL14P50914 215 aaKnown RBP12.19□□□□□ -0.46
HMGN1-208ENST00000443046 UCP2P55851 309 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 ABCE1P61221 599 aaKnown RBP12.19□□□□□ -0.46
HMGN1-208ENST00000443046 RBBP4Q09028 425 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 BAMBIQ13145 260 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 SLC9A3R2Q15599 337 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 FAM209AQ5JX71 171 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 NUDCD3Q8IVD9 361 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 C11orf40Q8WZ69 217 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 TAF15Q92804 592 aaKnown RBP eCLIP12.19□□□□□ -0.46
HMGN1-208ENST00000443046 MOGAT1Q96PD6 335 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 NUF2Q9BZD4 464 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 SAP30LQ9HAJ7 183 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 TPT1P8Q9HAU6 139 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 MMP26Q9NRE1 261 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 THUMPD1Q9NXG2 353 aaKnown RBP12.19□□□□□ -0.46
HMGN1-208ENST00000443046 MRPL39Q9NYK5 338 aaKnown RBP12.19□□□□□ -0.46
HMGN1-208ENST00000443046 PURGQ9UJV8 347 aaKnown RBP12.19□□□□□ -0.46
HMGN1-208ENST00000443046 ZNF281Q9Y2X9 895 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 MMP24Q9Y5R2 645 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 GPR45Q9Y5Y3 372 aa12.19□□□□□ -0.46
HMGN1-208ENST00000443046 ZNF726A6NNF4 738 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 TRAPPC2LH3BP13 241 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 PLPP3O14495 311 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 SERPINE1P05121 402 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 OR8G3PP0DMU2 310 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 CCL2P13500 99 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 NQO1P15559 274 aaKnown RBP12.18□□□□□ -0.46
HMGN1-208ENST00000443046 MAKP20794 623 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 ATP4BP51164 291 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 MMP15P51511 669 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 PUDPQ08623 228 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 ZNF154Q13106 437 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms