RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ZNF620Q6ZNG0 422 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 AMIGO2Q86SJ2 522 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 GPR137CQ8N3F9 429 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 LINC00471Q8N535 108 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 CLDN22Q8N7P3 220 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 WDR31Q8NA23 367 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 OR10G2Q8NGC3 310 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 FANK1Q8TC84 345 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 GIPC3Q8TF64 312 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 LRTOMTQ8WZ04 291 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 SAMD8Q96LT4 415 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 Q96M85 177 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 DACH2Q96NX9 599 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 MUS81Q96NY9 551 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 RAB3IPQ96QF0 476 aaPredicted RBP14.07□□□□□ -0.16
USP39-205ENST00000442708 GPX7Q96SL4 187 aaPredicted RBP14.07□□□□□ -0.16
USP39-205ENST00000442708 FEVQ99581 238 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 NIPSNAP1Q9BPW8 284 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 OR52D1Q9H346 318 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 NELFAQ9H3P2 528 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 EGLN3Q9H6Z9 239 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 NRIP3Q9NQ35 241 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 GLTPQ9NZD2 209 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 NDRG3Q9UGV2 375 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 APCP25054 2843 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 ITPR2Q14571 2701 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 NBPF19A0A087WUL8 3843 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 A0A1W2PR80 420 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 CIB4A0PJX0 185 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 CD14P08571 375 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 ACVR1BP36896 505 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 CSNK1A1P48729 337 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 DAP3P51398 398 aaKnown RBP14.06□□□□□ -0.16
USP39-205ENST00000442708 ARF1P84077 181 aaKnown RBP14.06□□□□□ -0.16
USP39-205ENST00000442708 GK3PQ14409 553 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 TAB1Q15750 504 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 HIKESHIQ53FT3 197 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 SYT14Q8NB59 555 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 OR8D4Q8NGM9 314 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 OR1K1Q8NGR3 316 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 OR6N1Q8NGY5 312 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 BCL2L2Q92843 193 aaPredicted RBP14.06□□□□□ -0.16
USP39-205ENST00000442708 ZNF566Q969W8 418 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 NMD3Q96D46 503 aaKnown RBP14.06□□□□□ -0.16
USP39-205ENST00000442708 KCNK17Q96T54 332 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 DGCR6LQ9BY27 220 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 POLDIP3Q9BY77 421 aaKnown RBP14.06□□□□□ -0.16
USP39-205ENST00000442708 PLA2G12AQ9BZM1 189 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 PDP1Q9P0J1 537 aaPredicted RBP14.06□□□□□ -0.16
USP39-205ENST00000442708 MGAT4BQ9UQ53 548 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 IER3IP1Q9Y5U9 82 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 LRBAP50851 2863 aa14.06□□□□□ -0.16
USP39-205ENST00000442708 IGKV1D-43A0A0B4J1Z2 117 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 TEX13CA0A0J9YWL9 993 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 ARRDC5A6NEK1 342 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 OR5H1A6NKK0 313 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 IMPA2O14732 288 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 ENTPD5O75356 428 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 DEAF1O75398 565 aaPredicted RBP14.05□□□□□ -0.16
USP39-205ENST00000442708 E2F6O75461 281 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 SEC14L2O76054 403 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 PPP1R3DO95685 299 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 IGHG1P01857 330 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 PPP3CBP16298 524 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 FMODQ06828 376 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 DAZAP2Q15038 168 aaPredicted RBP14.05□□□□□ -0.16
USP39-205ENST00000442708 TAF11Q15544 211 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 STK11Q15831 433 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 RFX4Q33E94 735 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 MESTQ5EB52 335 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 DPY19L2P2Q6ZN68 376 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 RASSF6Q6ZTQ3 369 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 ABHD12BQ7Z5M8 362 aaPredicted RBP14.05□□□□□ -0.16
USP39-205ENST00000442708 ARIH2OSQ8N7S6 290 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 NOXO1Q8NFA2 376 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 RASD2Q96D21 266 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 BOD1Q96IK1 185 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 ULBP2Q9BZM5 246 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 SLC17A5Q9NRA2 495 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 REV1Q9UBZ9 1251 aa14.05□□□□□ -0.16
USP39-205ENST00000442708 A0A096LPE4 126 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 A0A1W2PPZ6 126 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 FAM221AA4D161 298 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 A6NNC1 897 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 DEFB108AA8MXU0 73 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 H7C1C5 153 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 SOX14O95416 240 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 SLC2A10O95528 541 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 QDPRP09417 244 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 CRYGSP22914 178 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 FASP25445 335 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 LOXP28300 417 aaPredicted RBP14.04□□□□□ -0.16
USP39-205ENST00000442708 CLRN1P58418 232 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 LCN6P62502 163 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 TIMM23BQ5SRD1 257 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 ALKBH2Q6NS38 261 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 SHQ1Q6PI26 577 aaKnown RBP14.04□□□□□ -0.16
USP39-205ENST00000442708 KLHL17Q6TDP4 642 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 CD300LDQ6UXZ3 194 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 WFDC8Q8IUA0 241 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms