RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 HMGCS1Q01581 520 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 AQP6Q13520 282 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 ARHGAP19Q14CB8 494 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 C16orf72Q14CZ0 275 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 DEFB116Q30KQ4 102 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 PHYHD1Q5SRE7 291 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 LYPD2Q6UXB3 125 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 C12orf56Q8IXR9 622 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 GEMIN6Q8WXD5 167 aaKnown RBP2.97□□□□□ -1.93
PFDN4-202ENST00000441080 STMN2Q93045 179 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 EXOSC8Q96B26 276 aaKnown RBP2.97□□□□□ -1.93
PFDN4-202ENST00000441080 FOPNLQ96NB1 174 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 RARRES2Q99969 163 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 KCTD14Q9BQ13 255 aaPredicted RBP2.97□□□□□ -1.93
PFDN4-202ENST00000441080 TMEM59Q9BXS4 323 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 GABARAPL3Q9BY60 117 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 NT5MQ9NPB1 228 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 LHX9Q9NQ69 397 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 CYTL1Q9NRR1 136 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 EXTL2Q9UBQ6 330 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 KANK1Q14678 1352 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 PPIAL4EA0A075B759 164 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 FAM240BA0A1B0GVZ2 78 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 A0A1W2PPE3 182 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 A0A1W2PPV9 198 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 PLAC8L1A1L4L8 177 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 ZNF324O75467 553 aaPredicted RBP2.96□□□□□ -1.94
PFDN4-202ENST00000441080 C1orf105O95561 183 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 ZDHHC11BP0C7U3 371 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 SMIM10L1P0DMW3 83 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 PPIAL4FP0DN26 164 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 MX1P20591 662 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 CCR8P51685 355 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 UGT2B15P54855 530 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 LINC00315P59091 139 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 PPIL2Q13356 520 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 GK3PQ14409 553 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 ZMYND11Q15326 602 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 TTLL9Q3SXZ7 439 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 CTSL3PQ5NE16 218 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 NBPF5PQ86XG9 351 aaPredicted RBP2.96□□□□□ -1.94
PFDN4-202ENST00000441080 SDR9C7Q8NEX9 313 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 LRRC58Q96CX6 371 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 SMIM10Q96HG1 83 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 OSBPL10Q9BXB5 764 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 GCOM2Q9BZD3 368 aaPredicted RBP2.96□□□□□ -1.94
PFDN4-202ENST00000441080 SUN2Q9UH99 717 aa2.96□□□□□ -1.94
PFDN4-202ENST00000441080 F11RQ9Y624 299 aaKnown RBP2.96□□□□□ -1.94
PFDN4-202ENST00000441080 IGKV2-28A0A075B6P5 120 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 A0A1B0GVI7 797 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 CIB4A0PJX0 185 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 ARHGEF35A5YM69 484 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 PSTPIP1O43586 416 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 ANGPTL7O43827 346 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 SOX15O60248 233 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 IGKV2D-28P01615 120 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 NCBP2P52298 156 aaKnown RBP eCLIP2.95□□□□□ -1.943e-6■■■■□ 21.7
PFDN4-202ENST00000441080 FBXW4P57775 412 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 RPL23AP62750 156 aaKnown RBP2.95□□□□□ -1.94
PFDN4-202ENST00000441080 RPS21P63220 83 aaKnown RBP2.95□□□□□ -1.94
PFDN4-202ENST00000441080 ENPEPQ07075 957 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 SLAQ13239 276 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 LINC00173Q6ZV60 143 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 RUFY3Q7L099 469 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 PEX26Q7Z412 305 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 EGFL6Q8IUX8 553 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 MREGQ8N565 214 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 Q8N976 141 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 BMFQ96LC9 184 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 TSSK3Q96PN8 268 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 SH3GL1Q99961 368 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 HYPKQ9NX55 129 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 SLC7A8Q9UHI5 535 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 IKZF2Q9UKS7 526 aa2.95□□□□□ -1.94
PFDN4-202ENST00000441080 A0A0B4J2A0 478 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 GOSR2O14653 212 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 AIREO43918 545 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 TMEM50AO95807 157 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 OMGP23515 440 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 TPMTP51580 245 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 ZNF92Q03936 586 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 SLC25A48Q6ZT89 311 aaKnown RBP2.94□□□□□ -1.94
PFDN4-202ENST00000441080 LHFPL3Q86UP9 236 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 OR4F6Q8NGB9 312 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 SLC22A8Q8TCC7 542 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 ZFP90Q8TF47 636 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 TSNARE1Q96NA8 513 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 COX16Q9P0S2 106 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 OR12D3Q9UGF7 316 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 SHPKQ9UHJ6 478 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 CD84Q9UIB8 345 aa2.94□□□□□ -1.94
PFDN4-202ENST00000441080 CEMIPQ8WUJ3 1361 aa2.93□□□□□ -1.94
PFDN4-202ENST00000441080 ZNF726A6NNF4 738 aa2.93□□□□□ -1.94
PFDN4-202ENST00000441080 NCF2P19878 526 aaPredicted RBP2.93□□□□□ -1.94
PFDN4-202ENST00000441080 AK4P27144 223 aaPredicted RBP2.93□□□□□ -1.94
PFDN4-202ENST00000441080 RORCP51449 518 aa2.93□□□□□ -1.94
PFDN4-202ENST00000441080 KCNJ2P63252 427 aa2.93□□□□□ -1.94
PFDN4-202ENST00000441080 IRX3P78415 501 aaPredicted RBP2.93□□□□□ -1.94
PFDN4-202ENST00000441080 SLC7A9P82251 487 aa2.93□□□□□ -1.94
PFDN4-202ENST00000441080 PRPSAP1Q14558 356 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms