RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 ACTC1P68032 377 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 ACTA1P68133 377 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 RUNX1T1Q06455 604 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 LINC01590Q5TEZ4 76 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 LHFPL3Q86UP9 236 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 ZBTB46Q86UZ6 589 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 MEIOBQ8N635 442 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 NEIL3Q8TAT5 605 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 ZNRF4Q8WWF5 429 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 CPNE4Q96A23 557 aaPredicted RBP18.05■□□□□ 0.48
VRK2-207ENST00000440705 OR5M11Q96RB7 305 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 KCNK17Q96T54 332 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 SF3B5Q9BWJ5 86 aaKnown RBP18.05■□□□□ 0.48
VRK2-207ENST00000440705 TSPAN10Q9H1Z9 355 aaPredicted RBP18.05■□□□□ 0.48
VRK2-207ENST00000440705 LDAHQ9H6V9 325 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 ERVK13-1Q9NX77 482 aa18.05■□□□□ 0.48
VRK2-207ENST00000440705 LSM2Q9Y333 95 aaKnown RBP18.05■□□□□ 0.48
VRK2-207ENST00000440705 DAPL1A0PJW8 107 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 C12orf71A8MTZ7 269 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 DCTN6O00399 190 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 CXCL13O43927 109 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 RAMP1O60894 148 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 MRPL3P09001 348 aaKnown RBP18.04■□□□□ 0.48
VRK2-207ENST00000440705 BLVRAP53004 296 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 UCNP55089 124 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 CLDN15P56746 228 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 RNFT1Q5M7Z0 435 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 GPR107Q5VW38 600 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 TRILQ7L0X0 811 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 OR10H4Q8NGA5 316 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 OR6X1Q8NH79 312 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 ZNF420Q8TAQ5 688 aaPredicted RBP18.04■□□□□ 0.48
VRK2-207ENST00000440705 SLC25A44Q96H78 314 aaPredicted RBP18.04■□□□□ 0.48
VRK2-207ENST00000440705 ADAD1Q96M93 576 aaKnown RBP18.04■□□□□ 0.48
VRK2-207ENST00000440705 UCN2Q96RP3 112 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 MGLLQ99685 303 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 PAQR5Q9NXK6 330 aaPredicted RBP18.04■□□□□ 0.48
VRK2-207ENST00000440705 B9D1Q9UPM9 204 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 KIAA1549Q9HCM3 1950 aa18.04■□□□□ 0.48
VRK2-207ENST00000440705 IGHV3-15A0A0B4J1V0 119 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 NPIPA2E9PIF3 369 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 NPIPA3F8WFD2 350 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 ZNF701M0R085 212 aaPredicted RBP18.03■□□□□ 0.48
VRK2-207ENST00000440705 TFECO14948 347 aaPredicted RBP18.03■□□□□ 0.48
VRK2-207ENST00000440705 SLC16A7O60669 478 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 OR2T7P0C7T2 308 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 HSMCR30P0CW71 290 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 ZNF708P17019 499 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 KLK2P20151 261 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 WNT4P56705 351 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 CLDN18P56856 261 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 ZNF169Q14929 603 aaPredicted RBP18.03■□□□□ 0.48
VRK2-207ENST00000440705 ARMCX4Q5H9R4 360 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 DNM1P34Q6PK57 102 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 KLHL36Q8N4N3 616 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 OR2T27Q8NH04 317 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 DEFB127Q9H1M4 99 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 RERGLQ9H628 205 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 EXO5Q9H790 373 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 RSL24D1Q9UHA3 163 aaKnown RBP18.03■□□□□ 0.48
VRK2-207ENST00000440705 TRGV5A0A0B4J1U4 118 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 ZNF726A6NNF4 738 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 FAM171A2A8MVW0 826 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 SMAD9O15198 467 aaKnown RBP18.03■□□□□ 0.48
VRK2-207ENST00000440705 IGHG1P01857 330 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 ZNF24P17028 368 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 RPS3AP61247 264 aaKnown RBP18.03■□□□□ 0.48
VRK2-207ENST00000440705 GALEQ14376 348 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 SLC17A1Q14916 467 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 TMPRSS11AQ6ZMR5 421 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 CREB3L2Q70SY1 520 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 SYT14Q8NB59 555 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 OR9K2Q8NGE7 335 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 OR52N1Q8NH53 320 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 RBP7Q96R05 134 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 ZNF649Q9BS31 505 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 EMC6Q9BV81 110 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 MRPL13Q9BYD1 178 aaKnown RBP18.03■□□□□ 0.48
VRK2-207ENST00000440705 KLHL13Q9P2N7 655 aa18.03■□□□□ 0.48
VRK2-207ENST00000440705 CAB39Q9Y376 341 aaPredicted RBP18.03■□□□□ 0.48
VRK2-207ENST00000440705 ALPK2Q86TB3 2170 aa18.02■□□□□ 0.48
VRK2-207ENST00000440705 APC2O95996 2303 aa18.02■□□□□ 0.48
VRK2-207ENST00000440705 SLC35F4A4IF30 521 aa18.02■□□□□ 0.47
VRK2-207ENST00000440705 NOL3O60936 208 aaKnown RBP18.02■□□□□ 0.47
VRK2-207ENST00000440705 TMBIM6P55061 237 aa18.02■□□□□ 0.47
VRK2-207ENST00000440705 TMPRSS3P57727 454 aa18.02■□□□□ 0.47
VRK2-207ENST00000440705 PMP22Q01453 160 aa18.02■□□□□ 0.47
VRK2-207ENST00000440705 VASNQ6EMK4 673 aa18.02■□□□□ 0.47
VRK2-207ENST00000440705 SLC35F2Q8IXU6 374 aa18.02■□□□□ 0.47
VRK2-207ENST00000440705 ZNF511Q8NB15 262 aa18.02■□□□□ 0.47
VRK2-207ENST00000440705 FNDC8Q8TC99 324 aa18.02■□□□□ 0.47
VRK2-207ENST00000440705 FAM122AQ96E09 287 aa18.02■□□□□ 0.47
VRK2-207ENST00000440705 YIPF6Q96EC8 236 aa18.02■□□□□ 0.47
VRK2-207ENST00000440705 FUNDC2Q9BWH2 189 aa18.02■□□□□ 0.47
VRK2-207ENST00000440705 TNRC6AQ8NDV7 1962 aaKnown RBP18.01■□□□□ 0.47
VRK2-207ENST00000440705 IGLV1-36A0A0B4J1U3 117 aa18.01■□□□□ 0.47
VRK2-207ENST00000440705 CENPBD1B2RD01 187 aa18.01■□□□□ 0.47
VRK2-207ENST00000440705 ITGB2P05107 769 aa18.01■□□□□ 0.47
VRK2-207ENST00000440705 NAA10P41227 235 aaPredicted RBP18.01■□□□□ 0.47
VRK2-207ENST00000440705 CLDN17P56750 224 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms