RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 OR6X1Q8NH79 312 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 PFN4Q8NHR9 129 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 RP9Q8TA86 221 aaKnown RBP17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 TMEM255BQ8WV15 326 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 TMEM239Q8WW34 195 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 SGTBQ96EQ0 304 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 ZNF426Q9BUY5 554 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 DYNLRB1Q9NP97 96 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 YAE1D1Q9NRH1 226 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 GLTPQ9NZD2 209 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 RIMS3Q9UJD0 308 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 UBL3O95164 117 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 IGHG1P01857 330 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 NPR2P20594 1047 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 KDELR2P33947 212 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 GALK2Q01415 458 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 ZP4Q12836 540 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 PIN1Q13526 163 aaPredicted RBP17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 DAG1Q14118 895 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 SWI5Q1ZZU3 235 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 SPATA21Q7Z572 469 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 SLC25A44Q96H78 314 aaPredicted RBP17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 PRSS27Q9BQR3 290 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 PLK3Q9H4B4 646 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 ZNF442Q9H7R0 627 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 NOX3Q9HBY0 568 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 TAS2R5Q9NYW4 299 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 FBXO9Q9UK97 447 aaPredicted RBP17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 MED31Q9Y3C7 131 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 SPEF1Q9Y4P9 236 aa17.22■□□□□ 0.35
SHROOM1-204ENST00000440118 hCG_2039718K7EN88 272 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 CD5LO43866 347 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 OR7A10O76100 309 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 FARS2O95363 451 aaKnown RBP17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 ZNF682O95780 498 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 F12P00748 615 aaPredicted RBP17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 ASAH2BP0C7U1 165 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 COX4I1P13073 169 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 THBS4P35443 961 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 GIPRP48546 466 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 PDLIM4P50479 330 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 DAP3P51398 398 aaKnown RBP17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 UGT2B15P54855 530 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 RPL18Q07020 188 aaKnown RBP17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 EFNB3Q15768 340 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 GKAP1Q5VSY0 366 aaPredicted RBP17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 NKAIN4Q8IVV8 208 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 SVOPLQ8N434 492 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 ANKS4BQ8N8V4 417 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 OR10H5Q8NGA6 315 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 SORCS2Q96PQ0 1159 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 PIMREGQ9BSJ6 248 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 RAB1BQ9H0U4 201 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 MEPEQ9NQ76 525 aaPredicted RBP17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 FBXL3Q9UKT7 428 aa17.21■□□□□ 0.35
SHROOM1-204ENST00000440118 TLX2O43763 284 aaPredicted RBP17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 F13BP05160 661 aa17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 THRBP10828 461 aa17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 FUT1P19526 365 aa17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 HGFACQ04756 655 aa17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 KRTAP1-1Q07627 177 aa17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 ST3GAL3Q11203 375 aa17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 MST1LQ2TV78 715 aa17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 WDFY1Q8IWB7 410 aa17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 TMEM54Q969K7 222 aa17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 MS4A3Q96HJ5 214 aa17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 PRRC1Q96M27 445 aa17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 INIPQ9NRY2 104 aa17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 STX18Q9P2W9 335 aaKnown RBP17.2■□□□□ 0.34
SHROOM1-204ENST00000440118 IFNW1P05000 195 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 OR8G3PP0DMU2 310 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 PPOXP50336 477 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 NUDT2P50583 147 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 ZNF84P51523 738 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 SLC7A2P52569 658 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 RAB1AP62820 205 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 SELENOWP63302 87 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 LIPEQ05469 1076 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 NHLRC1Q6VVB1 395 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 ZNF627Q7L945 461 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 PIWIL3Q7Z3Z3 882 aaKnown RBP17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 SLC22A24Q8N4F4 322 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 NOXO1Q8NFA2 376 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 C10orf105Q8TEF2 133 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 FAM107BQ9H098 131 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 DENND2DQ9H6A0 471 aaPredicted RBP17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 RNF121Q9H920 327 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 EFCAB1Q9HAE3 211 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 MYOZ1Q9NP98 299 aaPredicted RBP17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 C20orf141Q9NUB4 165 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 TMEM38BQ9NVV0 291 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 CMTM6Q9NX76 183 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 B3GNT2Q9NY97 397 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 CMAHPQ9Y471 501 aa17.19■□□□□ 0.34
SHROOM1-204ENST00000440118 SH3PXD2BA1X283 911 aa17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 DHHO43323 396 aa17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 QDPRP09417 244 aa17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 PGA4P0DJD7 388 aa17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 PGA3P0DJD8 388 aa17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 AQP2P41181 271 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms