RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ZNF701Q9NV72 531 aaPredicted RBP20.61■□□□□ 0.89
VARS-217ENST00000440048 CRNNQ9UBG3 495 aaPredicted RBP20.61■□□□□ 0.89
VARS-217ENST00000440048 FAM32AQ9Y421 112 aaKnown RBP20.61■□□□□ 0.89
VARS-217ENST00000440048 V9GYQ6 96 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 ZNF503-AS2A6NEH8 195 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 ARPC2O15144 300 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 PGA4P0DJD7 388 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 PGA3P0DJD8 388 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 VLDLRP98155 873 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 SPATS1Q496A3 300 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 Q5PR19 223 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 ZNF730Q6ZMV8 503 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 ZNF813Q6ZN06 617 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 MBOAT2Q6ZWT7 520 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 ZNF627Q7L945 461 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 ASB10Q8WXI3 467 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 PYURFQ96I23 114 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 NSMCE2Q96MF7 247 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 ANKRD19PQ9H560 264 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 HIF3AQ9Y2N7 669 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 ATP23Q9Y6H3 246 aa20.6■□□□□ 0.89
VARS-217ENST00000440048 ATP6V1G2-DDX39BF2Z307 99 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 hCG_2039718K7EN88 272 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 OVOL3O00110 214 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 IGLV1-44P01699 117 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 CD8AP01732 235 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 H1F0P07305 194 aaKnown RBP20.59■□□□□ 0.89
VARS-217ENST00000440048 SAGP10523 405 aaPredicted RBP20.59■□□□□ 0.89
VARS-217ENST00000440048 FOSL1P15407 271 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 RHCEP18577 417 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 RUNX1T1Q06455 604 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 C3orf36Q3SXR2 165 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 LRFN4Q6PJG9 635 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 CCDC36Q8IYA8 594 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 FAM169BQ8N8A8 192 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 FOXB1Q99853 325 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 DHRS9Q9BPW9 319 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 TRAF4Q9BUZ4 470 aaPredicted RBP20.59■□□□□ 0.89
VARS-217ENST00000440048 MOV10Q9HCE1 1003 aaKnown RBP20.59■□□□□ 0.89
VARS-217ENST00000440048 MOKQ9UQ07 419 aa20.59■□□□□ 0.89
VARS-217ENST00000440048 MCIDASD6RGH6 385 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 DIRAS1O95057 198 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 IGKV3-15P01624 115 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 IGHG1P01857 330 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 CECR9P0C854 216 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 T-ENOLP0DO92 83 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 B4GALT1P15291 398 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 CBR1P16152 277 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 CAPZA2P47755 286 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 DAP3P51398 398 aaKnown RBP20.58■□□□□ 0.89
VARS-217ENST00000440048 PODNL1Q6PEZ8 512 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 DTX2Q86UW9 622 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 SLC7A13Q8TCU3 470 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 MRPL13Q9BYD1 178 aaKnown RBP20.58■□□□□ 0.89
VARS-217ENST00000440048 SEC61A2Q9H9S3 476 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 FAIMQ9NVQ4 179 aa20.58■□□□□ 0.89
VARS-217ENST00000440048 A0A1W2PRQ8 180 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 EFCAB9A8MZ26 197 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 SEMG1P04279 462 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 CELA3BP08861 270 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 ACADSP16219 412 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 CALB2P22676 271 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 TTKP33981 857 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 CLRN1P58418 232 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 FHL1Q13642 323 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 DGCR6Q14129 220 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 IQCCQ4KMZ1 466 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 ALG10Q5BKT4 473 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 ARMC4Q5T2S8 1044 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 PRSS57Q6UWY2 283 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 RINLQ6ZS11 566 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 RRM2BQ7LG56 351 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 HDDC2Q7Z4H3 204 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 MDP1Q86V88 176 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 CDK20Q8IZL9 346 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 OR51A7Q8NH64 312 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 GTPBP3Q969Y2 492 aaKnown RBP20.57■□□□□ 0.88
VARS-217ENST00000440048 SEPHS2Q99611 448 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 KATNB1Q9BVA0 655 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 B3GNT2Q9NY97 397 aa20.57■□□□□ 0.88
VARS-217ENST00000440048 TRAV27A0A087WT01 109 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 NPIPB13A6NJU9 1138 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 CENPBD1B2RD01 187 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 NPIPB4C9JG80 1138 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 DHHO43323 396 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 TRMUO75648 421 aaKnown RBP20.56■□□□□ 0.88
VARS-217ENST00000440048 HLA-HP01893 362 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 QDPRP09417 244 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 CDKN1AP38936 164 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 GPR4P46093 362 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 FABP6P51161 128 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 IDH3GP51553 393 aaPredicted RBP20.56■□□□□ 0.88
VARS-217ENST00000440048 ATP5J2P56134 94 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 NAAAQ02083 359 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 HIST3H3Q16695 136 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 FGD3Q5JSP0 725 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 AGAP6Q5VW22 663 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 TMPRSS11FQ6ZWK6 438 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 YTHDF3Q7Z739 585 aaKnown RBP20.56■□□□□ 0.88
VARS-217ENST00000440048 OAFQ86UD1 273 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms