RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 GDF7Q7Z4P5 450 aa13.54□□□□□ -0.24
PCNX1-202ENST00000439984 MARVELD1Q9BSK0 173 aa13.54□□□□□ -0.24
PCNX1-202ENST00000439984 C8orf33Q9H7E9 229 aaPredicted RBP13.54□□□□□ -0.24
PCNX1-202ENST00000439984 CD70P32970 193 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 CSNK1DP48730 415 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 MARCH8Q5T0T0 291 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 KIAA0319Q5VV43 1072 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 HINT3Q9NQE9 182 aaKnown RBP13.53□□□□□ -0.24
PCNX1-202ENST00000439984 PRODH2Q9UF12 536 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 SLC11A1P49279 550 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 DHPSP49366 369 aaPredicted RBP13.53□□□□□ -0.24
PCNX1-202ENST00000439984 CTSCP53634 463 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 ALKBH1Q13686 389 aaKnown RBP13.53□□□□□ -0.24
PCNX1-202ENST00000439984 GLYR1Q49A26 553 aaPredicted RBP13.53□□□□□ -0.24
PCNX1-202ENST00000439984 C2orf27AQ580R0 203 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 GABRG1Q8N1C3 465 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 OR5D18Q8NGL1 313 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 C1QTNF3Q9BXJ4 246 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 FBXO4Q9UKT5 387 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 A0A1W2PPV4 95 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 TMEM212A6NML5 194 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 ITGB7P26010 798 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 TUSC1Q2TAM9 212 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 MANEAQ5SRI9 462 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 UQCC3Q6UW78 93 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 NKAIN4Q8IVV8 208 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 ZNF610Q8N9Z0 462 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 OR4C5Q8NGB2 326 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 PFN4Q8NHR9 129 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 CHAC2Q8WUX2 184 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 MITD1Q8WV92 249 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 TMEM38AQ9H6F2 299 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 TRBV23-1A0A0A0MS06 115 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 LOC105371267A0A1B0GV96 52 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 MT-ND4LP03901 98 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 ADH5P11766 374 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 CALCRP30988 508 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 GGTA1PQ4G0N0 100 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 GLDNQ6ZMI3 551 aaPredicted RBP13.53□□□□□ -0.24
PCNX1-202ENST00000439984 OVCH1Q7RTY7 1134 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 ZFP62Q8NB50 900 aaPredicted RBP13.53□□□□□ -0.24
PCNX1-202ENST00000439984 hCG_1809904A0A1W2PP81 198 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 A0A1W2PR64 198 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 A0A1W2PRV1 198 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 PRAMEF27A3QJZ7 478 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 FGF19O95750 216 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 RPL29P47914 159 aaKnown RBP13.53□□□□□ -0.24
PCNX1-202ENST00000439984 CARD18P57730 90 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 TAS2R46P59540 309 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 PLCXD2Q0VAA5 305 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 GSG1Q2KHT4 349 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 TMEM244Q5VVB8 128 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 PRAMEF9Q5VWM5 478 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 AFMIDQ63HM1 303 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 ZNF383Q8NA42 475 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 NXF2Q9GZY0 626 aaKnown RBP13.53□□□□□ -0.24
PCNX1-202ENST00000439984 SLC39A9Q9NUM3 307 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 XRCC3O43542 346 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 FCGR2CP31995 323 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 CD300LGQ6UXG3 332 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 OR1S2Q8NGQ3 325 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 DERL3Q96Q80 235 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 HRASLS2Q9NWW9 162 aa13.53□□□□□ -0.24
PCNX1-202ENST00000439984 GDF2Q9UK05 429 aaPredicted RBP13.53□□□□□ -0.24
PCNX1-202ENST00000439984 PTBP3O95758 552 aaKnown RBP13.52□□□□□ -0.24
PCNX1-202ENST00000439984 GALTP07902 379 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 H2AFB1P0C5Y9 115 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 SMIM6P0DI80 62 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 PI3P19957 117 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 PGCP20142 388 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 GLO1Q04760 184 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 TAF9Q16594 264 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 BCO1Q9HAY6 547 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 MED9Q9NWA0 146 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 AK3Q9UIJ7 227 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 NTNG1Q9Y2I2 539 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 ZNF337Q9Y3M9 751 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 V9GYH0 126 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 GLI4P10075 376 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 LAG3P18627 525 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 FGF7P21781 194 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 PDX1P52945 283 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 RAB1AP62820 205 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 SHEQ5VZ18 495 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 ISOC2Q96AB3 205 aa13.52□□□□□ -0.24
PCNX1-202ENST00000439984 LGALSLQ3ZCW2 172 aaPredicted RBP13.52□□□□□ -0.25
PCNX1-202ENST00000439984 OR4C16Q8NGL9 310 aa13.52□□□□□ -0.25
PCNX1-202ENST00000439984 PEX11GQ96HA9 241 aa13.52□□□□□ -0.25
PCNX1-202ENST00000439984 SCLYQ96I15 445 aa13.52□□□□□ -0.25
PCNX1-202ENST00000439984 MYADMQ96S97 322 aa13.52□□□□□ -0.25
PCNX1-202ENST00000439984 TEAD3Q99594 435 aa13.52□□□□□ -0.25
PCNX1-202ENST00000439984 PELI2Q9HAT8 420 aa13.52□□□□□ -0.25
PCNX1-202ENST00000439984 TLR9Q9NR96 1032 aa13.52□□□□□ -0.25
PCNX1-202ENST00000439984 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.52□□□□□ -0.25
PCNX1-202ENST00000439984 SLC6A13Q9NSD5 602 aa13.52□□□□□ -0.25
PCNX1-202ENST00000439984 A0A1W2PPH5 198 aa13.52□□□□□ -0.25
PCNX1-202ENST00000439984 TSPAN12O95859 305 aa13.52□□□□□ -0.25
PCNX1-202ENST00000439984 PAX6P26367 422 aa13.52□□□□□ -0.25
PCNX1-202ENST00000439984 PRR22Q8IZ63 422 aa13.52□□□□□ -0.25
PCNX1-202ENST00000439984 CDRT4Q8N9R6 151 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms