RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 CARM1Q86X55 608 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 ANKS4BQ8N8V4 417 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 SEC61A2Q9H9S3 476 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 NOX3Q9HBY0 568 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 FGFR1OP2Q9NVK5 253 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 B3GNT2Q9NY97 397 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 GLTPQ9NZD2 209 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 ADAM21Q9UKJ8 722 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 A0A1W2PRG6 482 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 MCIDASD6RGH6 385 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 BLOC1S5-TXNDC5H3BN57 136 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 OR8G3PP0DMU2 310 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 NR4A1P22736 598 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 NR4A2P43354 598 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 GZMMP51124 257 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 REP15Q6BDI9 236 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 NHLRC1Q6VVB1 395 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 WDR88Q6ZMY6 472 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 DEF8Q6ZN54 512 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 SVOPLQ8N434 492 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 OR4D11Q8NGI4 311 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 ZNF426Q9BUY5 554 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 TAS2R5Q9NYW4 299 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 STX18Q9P2W9 335 aaKnown RBP16.28■□□□□ 0.2
CCDC78-204ENST00000439619 LPAR3Q9UBY5 353 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 AP3M1Q9Y2T2 418 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 JMJD1CQ15652 2540 aa16.28■□□□□ 0.2
CCDC78-204ENST00000439619 LOC100653049A0A140TA62 436 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 ZNF503-AS2A6NEH8 195 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 KRT34O76011 436 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 OR5F1O95221 314 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 LYPD3O95274 346 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 IGHG1P01857 330 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 MT-ND1P03886 318 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 THY1P04216 161 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 ASAH2BP0C7U1 165 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 APEHP13798 732 aaKnown RBP16.27■□□□□ 0.2
CCDC78-204ENST00000439619 GIPRP48546 466 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 CLRN1P58418 232 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 MYPOPQ86VE0 399 aaPredicted RBP16.27■□□□□ 0.2
CCDC78-204ENST00000439619 CALHM3Q86XJ0 350 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 LRRC17Q8N6Y2 441 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 C10orf82Q8WW14 230 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 LZICQ8WZA0 190 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 TMEM54Q969K7 222 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 DOK1Q99704 481 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 BEX2Q9BXY8 128 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 SAR1AQ9NR31 198 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 TMEM160Q9NX00 188 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 CAPN7Q9Y6W3 813 aa16.27■□□□□ 0.2
CCDC78-204ENST00000439619 SH3PXD2BA1X283 911 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 SLC22A2O15244 555 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 THRBP10828 461 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 DAOP14920 347 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 ZNF14P17017 642 aaPredicted RBP16.26■□□□□ 0.19
CCDC78-204ENST00000439619 EVX1P49640 407 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 DAP3P51398 398 aaKnown RBP16.26■□□□□ 0.19
CCDC78-204ENST00000439619 ZNF84P51523 738 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 SLC22A24Q8N4F4 322 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 OR2T12Q8NG77 320 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 SGTBQ96EQ0 304 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 MS4A3Q96HJ5 214 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 FOXN4Q96NZ1 517 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 MS4A5Q9H3V2 200 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 RIMS3Q9UJD0 308 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 MED31Q9Y3C7 131 aa16.26■□□□□ 0.19
CCDC78-204ENST00000439619 PLCE1Q9P212 2302 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 SLC22A23A1A5C7 686 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 HTR3EA5X5Y0 456 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 VWC2LB2RUY7 222 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 FXYD1O00168 92 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 DHHO43323 396 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 MGRN1O60291 552 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 PTHP01270 115 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 IGF2P01344 180 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 IGHV4-31P0DP07 118 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 NR2C1P13056 603 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 FUT1P19526 365 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 GLRXP35754 106 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 SF3A3Q12874 501 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCDC78-204ENST00000439619 MELKQ14680 651 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 SLC36A2Q495M3 483 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 LRRC23Q53EV4 343 aaPredicted RBP16.25■□□□□ 0.19
CCDC78-204ENST00000439619 FAM166AQ6J272 317 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 TMEM53Q6P2H8 277 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 ARPINQ7Z6K5 226 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 TMEM239Q8WW34 195 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 MRPL24Q96A35 216 aaKnown RBP16.25■□□□□ 0.19
CCDC78-204ENST00000439619 ZNF583Q96ND8 569 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 PRSS27Q9BQR3 290 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 SHARPINQ9H0F6 387 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 C1orf198Q9H425 327 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 RNF121Q9H920 327 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 TMEM38BQ9NVV0 291 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 SLC7A8Q9UHI5 535 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 KCNS2Q9ULS6 477 aa16.25■□□□□ 0.19
CCDC78-204ENST00000439619 FAM220BPB1ANY3 271 aa16.24■□□□□ 0.19
CCDC78-204ENST00000439619 CENPBD1B2RD01 187 aa16.24■□□□□ 0.19
CCDC78-204ENST00000439619 M0R233 179 aa16.24■□□□□ 0.19
CCDC78-204ENST00000439619 SYNGR3O43761 229 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms