RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 DNAJC5GQ8N7S2 189 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 OR1L3Q8NH93 324 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 PIGCQ92535 297 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 FKBP14Q9NWM8 211 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 GLS2Q9UI32 602 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 LOXL2Q9Y4K0 774 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 MEIOCA2RUB1 952 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 TBX19O60806 448 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 PIPP12273 146 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-205ENST00000439160 SPI1P17947 270 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 BCKDHBP21953 392 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 RNF4P78317 190 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 ALKBH1Q13686 389 aaKnown RBP11.24□□□□□ -0.61
TCOF1-205ENST00000439160 LAT2Q9GZY6 243 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 SMOC1Q9H4F8 434 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 COQ3Q9NZJ6 369 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 LOC102725191A0A1B0GVB3 256 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 EIF1BO60739 113 aaKnown RBP11.24□□□□□ -0.61
TCOF1-205ENST00000439160 SERPINA2P20848 420 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 FXYD4P59646 89 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 CFAP77Q6ZQR2 320 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 VASH1Q7L8A9 365 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-205ENST00000439160 CD163Q86VB7 1156 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 CADM3Q8N126 398 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 ZNF346Q9UL40 294 aaKnown RBP11.24□□□□□ -0.61
TCOF1-205ENST00000439160 NOSIPQ9Y314 301 aaKnown RBP11.24□□□□□ -0.61
TCOF1-205ENST00000439160 F5H0A9 414 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-205ENST00000439160 ENPP1P22413 925 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 APOBEC1P41238 236 aaKnown RBP11.24□□□□□ -0.61
TCOF1-205ENST00000439160 CCDC58Q4VC31 144 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 SIRT3Q9NTG7 399 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-205ENST00000439160 MED29Q9NX70 200 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 TEX46H3BTG2 121 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 DIRAS3O95661 229 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 MTNR1BP49286 362 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 CASP6P55212 293 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 CXADRP78310 365 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 EIF5AL1Q6IS14 154 aaKnown RBP11.23□□□□□ -0.61
TCOF1-205ENST00000439160 ZNF454Q8N9F8 522 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 KCTD12Q96CX2 325 aaKnown RBP11.23□□□□□ -0.61
TCOF1-205ENST00000439160 WWTR1Q9GZV5 400 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 RANBP3Q9H6Z4 567 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-205ENST00000439160 APMAPQ9HDC9 416 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 A0A1W2PPV9 198 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 ANKRD61A6NGH8 418 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 HYAL3O43820 417 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-205ENST00000439160 PNLIPRP2P54317 469 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 GALEQ14376 348 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 BEND4Q6ZU67 534 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 SLC16A9Q7RTY1 509 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 CPT1CQ8TCG5 803 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 ANKRD33BA6NCL7 494 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 ABOP16442 354 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 SDHAP31040 664 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 PTGS2P35354 604 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 DLSTP36957 453 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 RRADP55042 308 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 GABREP78334 506 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 MFAP5Q13361 173 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 SLC35D3Q5M8T2 416 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 AGAP6Q5VW22 663 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 CORO6Q6QEF8 472 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 UBE3DQ7Z6J8 389 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 ARIH2OSQ8N7S6 290 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 HSD17B8Q92506 261 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 AGAP4Q96P64 663 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 MNTQ99583 582 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 VN1R1Q9GZP7 353 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 ZNF700Q9H0M5 742 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 RABL2AQ9UBK7 228 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-205ENST00000439160 RABL2BQ9UNT1 228 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 PIKFYVEQ9Y2I7 2098 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 ARRDC5A6NEK1 342 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 SURF4O15260 269 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 NKX2-2O95096 273 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 PCBD1P61457 104 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 HSF1Q00613 529 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 ARL6IP1Q15041 203 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 ZIC1Q15915 447 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 TATDN3Q17R31 274 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 SYT9Q86SS6 491 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 PRR18Q8N4B5 295 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 PLPP7Q8NBV4 271 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 OR51D1Q8NGF3 324 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 ZMAT3Q9HA38 289 aaKnown RBP11.23□□□□□ -0.61
TCOF1-205ENST00000439160 C12orf4Q9NQ89 552 aa11.23□□□□□ -0.61
TCOF1-205ENST00000439160 ING1Q9UK53 422 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-205ENST00000439160 CKAP5Q14008 2032 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 FRG2CA6NGY1 282 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 CT62P0C5K7 136 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 CD34P28906 385 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 ZNF813Q6ZN06 617 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 SLC43A2Q8N370 569 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 CELF2-AS1Q8N7Q2 184 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 SLC25A43Q8WUT9 341 aaPredicted RBP11.22□□□□□ -0.61
TCOF1-205ENST00000439160 MIA3Q5JRA6 1907 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 SHISA7A6NL88 538 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 SCGNO76038 276 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 CSF1P09603 554 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms