RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 PDP1Q9P0J1 537 aaPredicted RBP8.1□□□□□ -1.11
AC011228.1-201ENST00000439027 SPIN1Q9Y657 262 aaPredicted RBP8.1□□□□□ -1.11
AC011228.1-201ENST00000439027 FBN1P35555 2871 aaKnown RBP8.1□□□□□ -1.11
AC011228.1-201ENST00000439027 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 CHD3Q12873 2000 aaKnown RBP8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 A0A087WUU8 490 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 SH3PXD2BA1X283 911 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 ELOA3DA6NLF2 546 aaPredicted RBP8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 ETV2O00321 342 aaPredicted RBP8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 SOCS2O14508 198 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 ABCD4O14678 606 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 CHP2O43745 196 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 NDUFS7O75251 213 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 CRLF1O75462 422 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 RAD51DO75771 328 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 CCNB2O95067 398 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 CD8AP01732 235 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 IGHV4-39P01824 125 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 CXCR1P25024 350 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 TACR3P29371 465 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 VHLP40337 213 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 APOBEC1P41238 236 aaKnown RBP8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 ZNF83P51522 516 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 OR2B6P58173 313 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 GK3PQ14409 553 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 MICAQ29983 383 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 PGGHGQ32M88 737 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 ELOA3BQ3SY89 546 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 ALG10BQ5I7T1 473 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 TIMM23BQ5SRD1 257 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 ZNF730Q6ZMV8 503 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 WDR88Q6ZMY6 472 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 RRM2BQ7LG56 351 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 P2RY8Q86VZ1 359 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 EPHX4Q8IUS5 362 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 GALNT4Q8N4A0 578 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 CBR4Q8N4T8 237 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 SVOPQ8N4V2 548 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 ZNF433Q8N7K0 673 aaPredicted RBP8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 ELOA3Q8NG57 546 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 OR10G2Q8NGC3 310 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 OR52N5Q8NH56 324 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 SLC7A13Q8TCU3 470 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 SLC25A43Q8WUT9 341 aaPredicted RBP8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 SLC38A4Q969I6 547 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 APH1AQ96BI3 265 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 C3orf49Q96BT1 292 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 SLC29A1Q99808 456 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 PRSS27Q9BQR3 290 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 FUZQ9BT04 418 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 TRAF4Q9BUZ4 470 aaPredicted RBP8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 ADAM19Q9H013 955 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 ANKRD19PQ9H560 264 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 SMURF2Q9HAU4 748 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 BARX1Q9HBU1 254 aaPredicted RBP8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 GDF2Q9UK05 429 aaPredicted RBP8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 POU2F3Q9UKI9 436 aa8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 NOSIPQ9Y314 301 aaKnown RBP8.09□□□□□ -1.11
AC011228.1-201ENST00000439027 A0A1W2PR80 420 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 OR5H1A6NKK0 313 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 SHISA9B4DS77 424 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 GPR171O14626 319 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 EI24O14681 340 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 SSX4O60224 188 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 PIP5K1CO60331 668 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 OR10H3O60404 316 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 PNMTP11086 282 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 ZNF26P17031 533 aaPredicted RBP8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 POLR2HP52434 150 aaKnown RBP8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 KRTAP1-1Q07627 177 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 AGAP6Q5VW22 663 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 FBXW9Q5XUX1 488 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 SLC22A25Q6T423 547 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 KLHL17Q6TDP4 642 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 SEZ6L2Q6UXD5 910 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 SSX8Q7RTT4 187 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 CCDC103Q8IW40 242 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 ATG16L2Q8NAA4 619 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 OR4K5Q8NGD3 323 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 OR9Q2Q8NGE9 314 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 PIGXQ8TBF5 258 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 TMEM239Q8WW34 195 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 ACOT11Q8WXI4 607 aaPredicted RBP8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 MPP4Q96JB8 637 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 ADAD1Q96M93 576 aaKnown RBP8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 FEVQ99581 238 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 RHNO1Q9BSD3 238 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 C1QTNF6Q9BXI9 259 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 OR11A1Q9GZK7 315 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 VCX3BQ9H321 246 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 NPAP1Q9NZP6 1156 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 KIF17Q9P2E2 1029 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 CHRNA9Q9UGM1 479 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 OSGIN1Q9UJX0 560 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 PRDM4Q9UKN5 801 aa8.08□□□□□ -1.12
AC011228.1-201ENST00000439027 IGKV3D-15A0A087WSY6 115 aa8.07□□□□□ -1.12
AC011228.1-201ENST00000439027 A0A087WUJ7 227 aa8.07□□□□□ -1.12
AC011228.1-201ENST00000439027 TMED7-TICAM2A0A0A6YYA0 188 aa8.07□□□□□ -1.12
AC011228.1-201ENST00000439027 E7EQL1 145 aa8.07□□□□□ -1.12
AC011228.1-201ENST00000439027 M0R1B8 84 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms