RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 MYBPC1Q00872 1141 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 GK3PQ14409 553 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 GABRA6Q16445 453 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 CEACAM16Q2WEN9 425 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 SMARCD3Q6STE5 483 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 ZNF620Q6ZNG0 422 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 HDDC2Q7Z4H3 204 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 WFDC8Q8IUA0 241 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 SYT14Q8NB59 555 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 ZNF519Q8TB69 540 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 GIPC3Q8TF64 312 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 PYDC1Q8WXC3 89 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 HDAC2Q92769 488 aaKnown RBP14.19□□□□□ -0.14
SNRPB-202ENST00000438552 TMEM54Q969K7 222 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 LRR1Q96L50 414 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 OR52D1Q9H346 318 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 EGLN3Q9H6Z9 239 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 B3GAT2Q9NPZ5 323 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 GLTPQ9NZD2 209 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 ZNF346Q9UL40 294 aaKnown RBP14.19□□□□□ -0.14
SNRPB-202ENST00000438552 PRR14LQ5THK1 2151 aa14.19□□□□□ -0.14
SNRPB-202ENST00000438552 TEX13CA0A0J9YWL9 993 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 A0A1W2PR80 420 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 OR5H1A6NKK0 313 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 RPL36A-HNRNPH2H7BZ11 118 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 PPP1R3DO95685 299 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 CD14P08571 375 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 ACADSP16219 412 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 ACVR1BP36896 505 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 ARF1P84077 181 aaKnown RBP14.18□□□□□ -0.14
SNRPB-202ENST00000438552 TGFBR3Q03167 851 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 TAF11Q15544 211 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 TAB1Q15750 504 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 ATP6AP1Q15904 470 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 HIKESHIQ53FT3 197 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 FAM122BQ7Z309 247 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 CLDN22Q8N7P3 220 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 C1orf162Q8NEQ5 155 aaPredicted RBP14.18□□□□□ -0.14
SNRPB-202ENST00000438552 OR1K1Q8NGR3 316 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 OR52N5Q8NH56 324 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 LRTOMTQ8WZ04 291 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 RASD2Q96D21 266 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 SAMD8Q96LT4 415 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 Q96M85 177 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 ZNF570Q96NI8 536 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 GPX7Q96SL4 187 aaPredicted RBP14.18□□□□□ -0.14
SNRPB-202ENST00000438552 DENND2DQ9H6A0 471 aaPredicted RBP14.18□□□□□ -0.14
SNRPB-202ENST00000438552 NTN4Q9HB63 628 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 PDP1Q9P0J1 537 aaPredicted RBP14.18□□□□□ -0.14
SNRPB-202ENST00000438552 MGAT4BQ9UQ53 548 aa14.18□□□□□ -0.14
SNRPB-202ENST00000438552 ARRDC5A6NEK1 342 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 A6NNC1 897 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 H7C1C5 153 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 SIAH2O43255 324 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 SOX14O95416 240 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 CRYGSP22914 178 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 SH3BGRP55822 239 aaPredicted RBP14.17□□□□□ -0.14
SNRPB-202ENST00000438552 LCN6P62502 163 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 TLE4Q04727 773 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 FMODQ06828 376 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 CD47Q08722 323 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 KRR1Q13601 381 aaKnown RBP14.17□□□□□ -0.14
SNRPB-202ENST00000438552 MESTQ5EB52 335 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 TIMM23BQ5SRD1 257 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 FAM205BPQ63HN1 556 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 OR7E24Q6IFN5 339 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 SEZ6L2Q6UXD5 910 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 AMIGO2Q86SJ2 522 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 MUS81Q96NY9 551 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 KCNK17Q96T54 332 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 FEVQ99581 238 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 NIPSNAP1Q9BPW8 284 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 DGCR6LQ9BY27 220 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 MRPL13Q9BYD1 178 aaKnown RBP14.17□□□□□ -0.14
SNRPB-202ENST00000438552 PLA2G12AQ9BZM1 189 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 NELFAQ9H3P2 528 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 NRIP3Q9NQ35 241 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 SLC17A5Q9NRA2 495 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 ZNF226Q9NYT6 803 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 GRHPRQ9UBQ7 328 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 MAGED1Q9Y5V3 778 aaPredicted RBP14.17□□□□□ -0.14
SNRPB-202ENST00000438552 CDH10Q9Y6N8 788 aa14.17□□□□□ -0.14
SNRPB-202ENST00000438552 A0A096LPE4 126 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 A0A1W2PPZ6 126 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 A6NIZ1 184 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 ZNF99A8MXY4 864 aaPredicted RBP14.16□□□□□ -0.14
SNRPB-202ENST00000438552 ANKRD65E5RJM6 399 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 CASKO14936 926 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 SLC2A10O95528 541 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 QDPRP09417 244 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 PRKACGP22612 351 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 FASP25445 335 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 SDHAP31040 664 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 HOXC12P31275 282 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 SLC6A6P31641 620 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 RAP1BP61224 184 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 RAP1AP62834 184 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 PPA1Q15181 289 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 HIST3H3Q16695 136 aa14.16□□□□□ -0.14
SNRPB-202ENST00000438552 RFX4Q33E94 735 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms