RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 CNOT9Q92600 299 aaKnown RBP10.26□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 RCC1LQ96I51 464 aaKnown RBP10.26□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 FAM71F1Q96KD3 344 aaPredicted RBP10.26□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 PRPF18Q99633 342 aaKnown RBP10.26□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 MRPL57Q9BQC6 102 aaKnown RBP10.26□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 MRPL46Q9H2W6 279 aaKnown RBP10.26□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 AKTIPQ9H8T0 292 aa10.26□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 SLCO1C1Q9NYB5 712 aa10.26□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 CCL27Q9Y4X3 112 aa10.26□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 WI2-2373I1.2A0A1W2PRP0 233 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 TM9SF1O15321 606 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 EIF3HO15372 352 aaKnown RBP eCLIP10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 RAD51CO43502 376 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 STX11O75558 287 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 TGDSO95455 350 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 LCKP06239 509 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 SDC1P18827 310 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 STX2P32856 288 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 MAGEA12P43365 314 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 SLC3A1Q07837 685 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 NAB1Q13506 487 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 HERPUD1Q15011 391 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 SPDYE7PQ495Y7 208 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 AP1ARQ63HQ0 302 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 LRRN1Q6UXK5 716 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 ZNF813Q6ZN06 617 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 KLHL36Q8N4N3 616 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 ARFGAP2Q8N6H7 521 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 ICA1LQ8NDH6 482 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 OR56A1Q8NGH5 318 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 RNF141Q8WVD5 230 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 DACT3Q96B18 629 aaPredicted RBP10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 ASPNQ9BXN1 380 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 ZNF350Q9GZX5 532 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 SLC35A3Q9Y2D2 325 aa10.25□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 IGHV2-70DA0A0C4DH43 119 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 SLC22A23A1A5C7 686 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 VAMP5O95183 116 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 RAB36O95755 333 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 KRT16P08779 473 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 B4GALT1P15291 398 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 PCBP3P57721 371 aaKnown RBP10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 ZMYND11Q15326 602 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 ESCO2Q56NI9 601 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 LCE2AQ5TA79 106 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 CARD17Q5XLA6 110 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 TYW3Q6IPR3 259 aaKnown RBP10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 C6orf89Q6UWU4 347 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 BTNL3Q6UXE8 466 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 Q6ZTK2 550 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 LRRC28Q86X40 367 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 DDIASQ8IXT1 998 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 CLEC4FQ8N1N0 589 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 SPICQ8N5J4 248 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 ZNF519Q8TB69 540 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 TBC1D15Q8TC07 691 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 DCAKDQ8WVC6 231 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 TAPBPLQ9BX59 468 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 DPH5Q9H2P9 285 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 TNFRSF12AQ9NP84 129 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 MID1IP1Q9NPA3 183 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 CGGBP1Q9UFW8 167 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 IL20RAQ9UHF4 553 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 FOXJ3Q9UPW0 622 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 RASD1Q9Y272 281 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 TANC2Q9HCD6 1990 aa10.24□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 ZSCAN5BA6NJL1 495 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 C3orf84H3BNL1 204 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 TNFRSF13BO14836 293 aaPredicted RBP10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 XPNPEP2O43895 674 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 C6orf47O95873 294 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 LAMP1P11279 417 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 LSP1P33241 339 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 MMP15P51511 669 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 PKNOX1P55347 436 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 FGF12P61328 243 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 KCNJ10P78508 379 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 RBBP4Q09028 425 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 CHI3L2Q15782 390 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 ARHGAP11BQ3KRB8 267 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 TMEM155Q4W5P6 130 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 GPR157Q5UAW9 335 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 ZNF774Q6NX45 483 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 C8orf74Q6P047 294 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 RNF130Q86XS8 419 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 TMEM123Q8N131 208 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 MNS1Q8NEH6 495 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 OR7A2PQ8NGA2 310 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 FBLIM1Q8WUP2 373 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 RAB40AQ8WXH6 277 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 C11orf40Q8WZ69 217 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 OR2M2Q96R28 347 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 EXOSC3Q9NQT5 275 aaKnown RBP10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 B3GAT1Q9P2W7 334 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 SIGLEC9Q9Y336 463 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 PCLOQ9Y6V0 5065 aa10.23□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 TSPAN9O75954 239 aa10.22□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 IGHV3-13P01766 116 aa10.22□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 SERPINA5P05154 406 aa10.22□□□□□ -0.77
SMAD9-IT1-201ENST00000437983 WNT2P09544 360 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms