RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 OR2F1Q13607 317 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 CD163Q86VB7 1156 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 RASGEF1AQ8N9B8 481 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 OR52E2Q8NGJ4 325 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 DNAJA3Q96EY1 480 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 C14orf144Q96I85 54 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 C1QTNF2Q9BXJ5 285 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 FN3KRPQ9HA64 309 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 MED17Q9NVC6 651 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 ZSWIM8A7E2V4 1837 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 H7BY64 318 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 SULT2B1O00204 365 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 TXNDC12O95881 172 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 ELFN1P0C7U0 828 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 C6P13671 934 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 LAP3P28838 519 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 LTBQ06643 244 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 MBOAT2Q6ZWT7 520 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 GALNTL5Q7Z4T8 443 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF761Q86XN6 746 aaPredicted RBP6.83□□□□□ -1.32
CPSF6-202ENST00000435070 CBARPQ8N350 705 aaPredicted RBP6.83□□□□□ -1.32
CPSF6-202ENST00000435070 DCUN1D4Q92564 292 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 MARS2Q96GW9 593 aaKnown RBP6.83□□□□□ -1.32
CPSF6-202ENST00000435070 TMEM41AQ96HV5 264 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 PRAP1Q96NZ9 151 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 LMF1Q96S06 567 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 ACKR4Q9NPB9 350 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 TREM2Q9NZC2 230 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 SCN2AQ99250 2005 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 LAMA2P24043 3122 aaKnown RBP6.83□□□□□ -1.32
CPSF6-202ENST00000435070 PLXNB2O15031 1838 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.83□□□□□ -1.32
CPSF6-202ENST00000435070 TRAPPC13A5PLN9 417 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF208O43345 1280 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 TMEM127O75204 238 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF28P17035 718 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 G0S2P27469 103 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 CERS1P27544 350 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 NDUFA6P56556 154 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 PON3Q15166 354 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 FAM189A2Q15884 450 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 STEAP1BQ6NZ63 245 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 HSD11B1LQ7Z5J1 315 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 SP7Q8TDD2 431 aaPredicted RBP6.83□□□□□ -1.32
CPSF6-202ENST00000435070 GRHL3Q8TE85 626 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 SEC11CQ9BY50 192 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 SUV39H2Q9H5I1 410 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF346Q9UL40 294 aaKnown RBP6.83□□□□□ -1.32
CPSF6-202ENST00000435070 ICKQ9UPZ9 632 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 DMRT1Q9Y5R6 373 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 GXYLT2A0PJZ3 443 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 NPC1O15118 1278 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 FBXO24O75426 580 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 INHAP05111 366 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 KHKP50053 298 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 PJVKQ0ZLH3 352 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 INPP5JQ15735 1006 aaPredicted RBP6.83□□□□□ -1.32
CPSF6-202ENST00000435070 GXYLT1Q4G148 440 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 OTPQ5XKR4 325 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 CLEC9AQ6UXN8 241 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 OVCH1Q7RTY7 1134 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 OR2L5Q8NG80 312 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 OR5AP2Q8NGF4 316 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 OR6N1Q8NGY5 312 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 ST7LQ8TDW4 575 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 SECTM1Q8WVN6 248 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 UBE2E3Q969T4 207 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 HS6ST2Q96MM7 605 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 SULT4A1Q9BR01 284 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 TRPM7Q96QT4 1865 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 RNASEK-C17orf49H0YIS7 233 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 FOXE1O00358 373 aaPredicted RBP6.82□□□□□ -1.32
CPSF6-202ENST00000435070 KIAA0355O15063 1070 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 SLCO2B1O94956 709 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 RAB3DO95716 219 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 NR2C1P13056 603 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 PSMB5P28074 263 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 SSR2P43308 183 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 SNRPNP63162 240 aaKnown RBP6.82□□□□□ -1.32
CPSF6-202ENST00000435070 COTL1Q14019 142 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF585AQ6P3V2 769 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 OR14C36Q8NHC7 312 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 ZBTB8AQ96BR9 441 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 C5orf34Q96MH7 638 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 SLC22A12Q96S37 553 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 RCC2Q9P258 522 aaKnown RBP6.82□□□□□ -1.32
CPSF6-202ENST00000435070 NCDNQ9UBB6 729 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 TAC3Q9UHF0 121 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 SCN3AQ9NY46 2000 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 H7C417 338 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 AKAIN1P0CW23 69 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 TUBG1P23258 451 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 DHRS2Q13268 280 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 TCEAL6Q6IPX3 200 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 OR2AP1Q8NGE2 309 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 OR5K2Q8NHB8 316 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 RNF141Q8WVD5 230 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 RAB3CQ96E17 227 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 TMPRSS5Q9H3S3 457 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 ABI3Q9P2A4 366 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms