RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 PLCL2Q9UPR0 1127 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 PCDHGA5Q9Y5G8 931 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 A0A1B0GTQ1 180 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 CDC14CA4D256 554 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 LINC00862A6NCI5 91 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 ACOT7O00154 380 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 ICMTO60725 284 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 CFDP00746 253 aaPredicted RBP10.7□□□□□ -0.7
CD44-209ENST00000433892 IGF2P01344 180 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 HIST1H2ABP04908 130 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 ALOX5APP20292 161 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 GABRA4P48169 554 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 CBFBQ13951 182 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 SERTAD2Q14140 314 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 KCNAB1Q14722 419 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 TOMM34Q15785 309 aaPredicted RBP10.7□□□□□ -0.7
CD44-209ENST00000433892 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.7□□□□□ -0.7
CD44-209ENST00000433892 C1QL3Q5VWW1 255 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 HIST3H2AQ7L7L0 130 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 PM20D2Q8IYS1 436 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 PRSS35Q8N3Z0 413 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 DEFB119Q8N690 84 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 HIST1H2ACQ93077 130 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 RELTQ969Z4 430 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 GAL3ST4Q96RP7 486 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 AMELYQ99218 206 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 NRSN2Q9GZP1 204 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 C8orf33Q9H7E9 229 aaPredicted RBP10.7□□□□□ -0.7
CD44-209ENST00000433892 NPDC1Q9NQX5 325 aaPredicted RBP10.7□□□□□ -0.7
CD44-209ENST00000433892 CA10Q9NS85 328 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 EMC3Q9P0I2 261 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 ZNF69Q9UC07 566 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 MSRAQ9UJ68 235 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 C11orf98E9PRG8 122 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 HCRTR2O43614 444 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 ICOSLGO75144 302 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 WISP1O95388 367 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 PPICP45877 212 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 OR1D4P47884 311 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 ARPC4P59998 168 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 TSPAN5P62079 268 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 PUDPQ08623 228 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 TOR2AQ5JU69 321 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 COL13A1Q5TAT6 717 aaPredicted RBP10.7□□□□□ -0.7
CD44-209ENST00000433892 GPR139Q6DWJ6 353 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 GLDNQ6ZMI3 551 aaPredicted RBP10.7□□□□□ -0.7
CD44-209ENST00000433892 MAMSTRQ6ZN01 415 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.7□□□□□ -0.7
CD44-209ENST00000433892 CDH24Q86UP0 819 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 GLB1L2Q8IW92 636 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.7□□□□□ -0.7
CD44-209ENST00000433892 ATOH1Q92858 354 aaPredicted RBP10.7□□□□□ -0.7
CD44-209ENST00000433892 TSLPQ969D9 159 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 MED30Q96HR3 178 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 KLHL15Q96M94 604 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 ZNF285Q96NJ3 590 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 MRI1Q9BV20 369 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 COMMD4Q9H0A8 199 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 EXOSC3Q9NQT5 275 aaKnown RBP10.7□□□□□ -0.7
CD44-209ENST00000433892 MGAT4CQ9UBM8 478 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 KCNG2Q9UJ96 466 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 PPIEQ9UNP9 301 aaKnown RBP10.7□□□□□ -0.7
CD44-209ENST00000433892 ETV7Q9Y603 341 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 TMEM131Q92545 1883 aa10.7□□□□□ -0.7
CD44-209ENST00000433892 A0A1W2PPC4 97 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 TMEM127O75204 238 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 RENP00797 406 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 ALDOBP05062 364 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 MRPS10P82664 201 aaKnown RBP10.69□□□□□ -0.7
CD44-209ENST00000433892 ZNF117Q03924 483 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 EMC4Q5J8M3 183 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 TCTE1Q5JU00 501 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 EEF1A1P5Q5VTE0 462 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 OLFML2AQ68BL7 652 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 LRRN1Q6UXK5 716 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 TTLL10Q6ZVT0 673 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 SLC35D2Q76EJ3 337 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 TMEM151BQ8IW70 566 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 MEIOBQ8N635 442 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 GPR148Q8TDV2 347 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 RBP7Q96R05 134 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 INTS14Q96SY0 518 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 LANCL2Q9NS86 450 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 GLTPQ9NZD2 209 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 THADAQ6YHU6 1953 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 CIB4A0PJX0 185 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 SHISA7A6NL88 538 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 RAD1O60671 282 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 ZNF254O75437 659 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 GLSO94925 669 aaPredicted RBP10.69□□□□□ -0.7
CD44-209ENST00000433892 NUDT14O95848 222 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 PLGP00747 810 aaPredicted RBP10.69□□□□□ -0.7
CD44-209ENST00000433892 IFNA7P01567 189 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 HLA-DQA2P01906 255 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 CXCR1P25024 350 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 RORAP35398 523 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 FASLGP48023 281 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 CENPAP49450 140 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 EFNB2P52799 333 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 DMWDQ09019 674 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms