RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 NDUFB2O95178 105 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 TXNDC12O95881 172 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 BCL10O95999 233 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 THBDP07204 575 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 IGFBP1P08833 259 aaPredicted RBP10.92□□□□□ -0.66
USP40-205ENST00000430158 FASP25445 335 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 CTXN1P60606 82 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 RPL27P61353 136 aaKnown RBP10.92□□□□□ -0.66
USP40-205ENST00000430158 ERVK-25P63136 954 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 FAPQ12884 760 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 CAMK2DQ13557 499 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 MELKQ14680 651 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 RFX4Q33E94 735 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 ZFP1Q6P2D0 407 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 FAHD1Q6P587 224 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 SMARCD3Q6STE5 483 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 DPY19L2P2Q6ZN68 376 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 RASSF6Q6ZTQ3 369 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 AMIGO2Q86SJ2 522 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 ZNF295-AS1Q8N0V1 137 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 CLDN22Q8N7P3 220 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 OR8D4Q8NGM9 314 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 HDAC2Q92769 488 aaKnown RBP10.92□□□□□ -0.66
USP40-205ENST00000430158 MUS81Q96NY9 551 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 WFIKKN1Q96NZ8 548 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 PKP2Q99959 881 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 KATNB1Q9BVA0 655 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 PLA2G12AQ9BZM1 189 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 OR52D1Q9H346 318 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 NELFAQ9H3P2 528 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 GPR35Q9HC97 309 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 S100A14Q9HCY8 104 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 KRCC1Q9NPI7 259 aaPredicted RBP10.92□□□□□ -0.66
USP40-205ENST00000430158 ASB6Q9NWX5 421 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 PDP1Q9P0J1 537 aaPredicted RBP10.92□□□□□ -0.66
USP40-205ENST00000430158 ADAM18Q9Y3Q7 739 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 A0A1W2PRG6 482 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 GNGT2O14610 69 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 ARPC3O15145 178 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 AKAP8O43823 692 aaKnown RBP10.91□□□□□ -0.66
USP40-205ENST00000430158 LYZL6O75951 148 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 FCGR1AP12314 374 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 APEHP13798 732 aaKnown RBP10.91□□□□□ -0.66
USP40-205ENST00000430158 ACADSP16219 412 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 MPGP29372 298 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 DAP3P51398 398 aaKnown RBP10.91□□□□□ -0.66
USP40-205ENST00000430158 IL1RL1Q01638 556 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 STK11Q15831 433 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 GABRA6Q16445 453 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 ZNF362Q5T0B9 420 aaPredicted RBP10.91□□□□□ -0.66
USP40-205ENST00000430158 KLHL17Q6TDP4 642 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 MEX3BQ6ZN04 569 aaKnown RBP10.91□□□□□ -0.66
USP40-205ENST00000430158 ZNF627Q7L945 461 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 ARIH2OSQ8N7S6 290 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 WDR31Q8NA23 367 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 OR5K1Q8NHB7 308 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 LINC01560Q8TB33 94 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 BCL2L2Q92843 193 aaPredicted RBP10.91□□□□□ -0.66
USP40-205ENST00000430158 CENPNQ96H22 339 aaPredicted RBP10.91□□□□□ -0.66
USP40-205ENST00000430158 SAMD8Q96LT4 415 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 Q96M85 177 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 ALKBH3Q96Q83 286 aaPredicted RBP10.91□□□□□ -0.66
USP40-205ENST00000430158 DDOQ99489 341 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 HDHD5Q9BXW7 423 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 GABARAPL1Q9H0R8 117 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 EGLN3Q9H6Z9 239 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 GLTPQ9NZD2 209 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 CRIM1Q9NZV1 1036 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 IL20RAQ9UHF4 553 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 CDH10Q9Y6N8 788 aa10.91□□□□□ -0.66
USP40-205ENST00000430158 IGKV1D-43A0A0B4J1Z2 117 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 FAM221AA4D161 298 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 ZNF726A6NNF4 738 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 BHLHE40O14503 412 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 SIAH2O43255 324 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 GSTM3P21266 225 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 PEX19P40855 299 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 DAPP51397 102 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 ROR2Q01974 943 aaKnown RBP10.9□□□□□ -0.66
USP40-205ENST00000430158 COX10Q12887 443 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 MESTQ5EB52 335 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 CARD17Q5XLA6 110 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 BHLHA15Q7RTS1 189 aaPredicted RBP10.9□□□□□ -0.66
USP40-205ENST00000430158 UBE2J2Q8N2K1 259 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 FANK1Q8TC84 345 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 KISS1RQ969F8 398 aaPredicted RBP10.9□□□□□ -0.66
USP40-205ENST00000430158 GTPBP3Q969Y2 492 aaKnown RBP10.9□□□□□ -0.66
USP40-205ENST00000430158 S100PBPQ96BU1 408 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 LRRC46Q96FV0 321 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 DACH2Q96NX9 599 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 ALG12Q9BV10 488 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 ACTR6Q9GZN1 396 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 CRLF2Q9HC73 371 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 TAS2R16Q9NYV7 291 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 IER3IP1Q9Y5U9 82 aa10.9□□□□□ -0.66
USP40-205ENST00000430158 SH3D21A4FU49 640 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 ERICH4A6NGS2 130 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 TUBAL3A6NHL2 446 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 ZNF587BE7ETH6 402 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 M0R3G1 203 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms