RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 SMIM29Q86T20 159 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 SETD3Q86TU7 594 aaPredicted RBP3.46□□□□□ -1.86
HMGB3-203ENST00000430118 COMTD1Q86VU5 262 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 WDR49Q8IV35 697 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 UBE2J2Q8N2K1 259 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 CIARTQ8N365 385 aaPredicted RBP3.46□□□□□ -1.86
HMGB3-203ENST00000430118 RAB42Q8N4Z0 105 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 FNDC5Q8NAU1 212 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 LINC00301Q8NCQ3 95 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 ADAD2Q8NCV1 583 aaKnown RBP3.46□□□□□ -1.86
HMGB3-203ENST00000430118 OR5AU1Q8NGC0 362 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 LMO3Q8TAP4 145 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 CAPSLQ8WWF8 208 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 LIPHQ8WWY8 451 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 S100ZQ8WXG8 99 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 MCHR2Q969V1 340 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 KIAA1143Q96AT1 154 aaPredicted RBP3.46□□□□□ -1.86
HMGB3-203ENST00000430118 ZNF524Q96C55 264 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 MAGEB18Q96M61 343 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 VSTM2LQ96N03 204 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 MED10Q9BTT4 135 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 ZSCAN5AQ9BUG6 496 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 C1orf50Q9BV19 199 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 GOLPH3Q9H4A6 298 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 ARMC7Q9H6L4 198 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 TRIM45Q9H8W5 580 aaPredicted RBP3.46□□□□□ -1.86
HMGB3-203ENST00000430118 LRRC40Q9H9A6 602 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 CAB39LQ9H9S4 337 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 MRPL40Q9NQ50 206 aaKnown RBP3.46□□□□□ -1.86
HMGB3-203ENST00000430118 TEX10Q9NXF1 929 aaPredicted RBP3.46□□□□□ -1.86
HMGB3-203ENST00000430118 RBAKQ9NYW8 714 aaPredicted RBP3.46□□□□□ -1.86
HMGB3-203ENST00000430118 KLHL8Q9P2G9 620 aaPredicted RBP3.46□□□□□ -1.86
HMGB3-203ENST00000430118 KLK11Q9UBX7 282 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 CD300AQ9UGN4 299 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 ENOPH1Q9UHY7 261 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 KCNG2Q9UJ96 466 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 GUCA1BQ9UMX6 200 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 B9D1Q9UPM9 204 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 ACOT9Q9Y305 439 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 SLC6A5Q9Y345 797 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 ASB4Q9Y574 426 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 AP4S1Q9Y587 144 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 GMPPBQ9Y5P6 360 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 AUP1Q9Y679 476 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 ZFHX3Q15911 3703 aa3.46□□□□□ -1.86
HMGB3-203ENST00000430118 TP53BP1Q12888 1972 aaPredicted RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 ABCA12Q86UK0 2595 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 MYLKQ15746 1914 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 A0A087WWV3 80 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 NPIPA5A0A0B4J1W7 369 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 PQLC2LA1A4F0 135 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 FBLL1A6NHQ2 334 aaKnown RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 NPIPA5E9PKD4 350 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 F8W036 122 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 MKRN2OSH3BPM6 223 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 PSMD11O00231 422 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 WRBO00258 174 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 INPP4BO15327 924 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 RGS16O15492 202 aaPredicted RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 FAM189A1O60320 539 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 CIB2O75838 187 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 ANXA9O76027 345 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 OR7A10O76100 309 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 HPRP00739 348 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 CISD3P0C7P0 127 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 PRSS56P0CW18 603 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 THRAP10827 490 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 RAB3AP20336 220 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 WARSP23381 471 aaKnown RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 FCGR2CP31995 323 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 CDH5P33151 784 aaPredicted RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 UGT2B10P36537 528 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 FDFT1P37268 417 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 PTGFRP43088 359 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 GNPDA1P46926 289 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 POU3F4P49335 361 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 SGSHP51688 502 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 NDUFA8P51970 172 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 NDST2P52849 883 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 NKX2-5P52952 324 aaPredicted RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 PAX9P55771 341 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 XGP55808 180 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 ERVK-16P61578 105 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 CYCSP99999 105 aaKnown RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 KRR1Q13601 381 aaKnown RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 COTL1Q14019 142 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 ELAVL3Q14576 367 aaKnown RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 ZNF846Q147U1 533 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 HKDC1Q2TB90 917 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 ZBED5Q49AG3 693 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 C10orf120Q5SQS8 335 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 OGFRL1Q5TC84 451 aaPredicted RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 C1orf146Q5VVC0 180 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 ELP2Q6IA86 826 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 LEG1Q6P5S2 330 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 ZNF730Q6ZMV8 503 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 PLEKHG7Q6ZR37 379 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 EFL1Q7Z2Z2 1120 aaKnown RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 PARGQ86W56 976 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 TRIM69Q86WT6 500 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms