RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 SIPA1Q96FS4 1042 aa13.66□□□□□ -0.22
LINC00839-202ENST00000429940 RBM18Q96H35 190 aaKnown RBP13.66□□□□□ -0.22
LINC00839-202ENST00000429940 G6PC3Q9BUM1 346 aa13.66□□□□□ -0.22
LINC00839-202ENST00000429940 UBE2ZQ9H832 354 aaPredicted RBP13.66□□□□□ -0.22
LINC00839-202ENST00000429940 TAS2R8Q9NYW2 309 aa13.66□□□□□ -0.22
LINC00839-202ENST00000429940 STEAP1Q9UHE8 339 aa13.66□□□□□ -0.22
LINC00839-202ENST00000429940 SERINC4A6NH21 518 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 H3BSH0 61 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 LGALS8O00214 317 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 TSPAN9O75954 239 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 ADH7P40394 386 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 PSMD4P55036 377 aaKnown RBP13.65□□□□□ -0.22
LINC00839-202ENST00000429940 MAZP56270 477 aaKnown RBP13.65□□□□□ -0.22
LINC00839-202ENST00000429940 OR7E24Q6IFN5 339 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 MUC20Q8N307 709 aaPredicted RBP13.65□□□□□ -0.22
LINC00839-202ENST00000429940 EXD3Q8N9H8 876 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 OR9A4Q8NGU2 314 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 OR4C3Q8NH37 302 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 OR8K3Q8NH51 312 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 FAM131CQ96AQ9 280 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 CCDC3Q9BQI4 270 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 SRA1Q9HD15 236 aaKnown RBP13.65□□□□□ -0.22
LINC00839-202ENST00000429940 Q9N2J8 555 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 LAMP5Q9UJQ1 280 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 MOKQ9UQ07 419 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 IGKV1D-42A0A075B6H8 117 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 TMEM265A0A087WTH1 108 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 SLC22A23A1A5C7 686 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 GGT3PA6NGU5 568 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 TVP23AA6NH52 213 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 ELOA3DA6NLF2 546 aaPredicted RBP13.65□□□□□ -0.22
LINC00839-202ENST00000429940 H0YC42 278 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 TEX46H3BTG2 121 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 ABHD16AO95870 558 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 HOXC4P09017 264 aaPredicted RBP13.65□□□□□ -0.22
LINC00839-202ENST00000429940 TFF2Q03403 129 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 ODF4Q2M2E3 257 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 ELOA3BQ3SY89 546 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 DCAF12L2Q5VW00 463 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 FAM122CQ6P4D5 195 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 FAM122BQ7Z309 247 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 CDC20BQ86Y33 519 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 ZNF595Q8IYB9 648 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 SDR16C5Q8N3Y7 309 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 DEFB123Q8N688 67 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 ZNF676Q8N7Q3 588 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 ELOA3Q8NG57 546 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 ZNF417Q8TAU3 575 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 PATE1Q8WXA2 126 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 TMEM106AQ96A25 262 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 GUCD1Q96NT3 240 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 AIFM2Q9BRQ8 373 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 SLC19A3Q9BZV2 496 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 MS4A7Q9GZW8 240 aaPredicted RBP13.65□□□□□ -0.22
LINC00839-202ENST00000429940 COMMD4Q9H0A8 199 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 TMEM138Q9NPI0 162 aa13.65□□□□□ -0.22
LINC00839-202ENST00000429940 EML5Q05BV3 1969 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 CHURC1-FNTBB4DL54 471 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 FOXS1O43638 330 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 ZNF254O75437 659 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 CD14P08571 375 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 GTF2F2P13984 249 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 SCAND1P57086 179 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 CTXN1P60606 82 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 GMFBP60983 142 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 MAT1AQ00266 395 aaKnown RBP13.64□□□□□ -0.23
LINC00839-202ENST00000429940 GUCA2AQ02747 115 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 ALG10Q5BKT4 473 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 YOD1Q5VVQ6 348 aaPredicted RBP13.64□□□□□ -0.23
LINC00839-202ENST00000429940 OR51A4Q8NGJ6 313 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 OR6N1Q8NGY5 312 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 OR10AC1Q8NH08 325 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 TNFAIP8L1Q8WVP5 186 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 ARPC5LQ9BPX5 153 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 ZC4H2Q9NQZ6 224 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 CDV3Q9UKY7 258 aaKnown RBP13.64□□□□□ -0.23
LINC00839-202ENST00000429940 HIF3AQ9Y2N7 669 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 OR10H1Q9Y4A9 318 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 TRBV5-7A0A0A0MS05 114 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 A0A0J9YY10 115 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 TCRBV16S1A1N1A0A5B0 115 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 MEIS3P1A6NDR6 274 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 OR4C45A6NMZ5 311 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 H7C1C5 153 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 DCTN6O00399 190 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 MBTPS2O43462 519 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 HCRTR1O43613 425 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 CTAG2O75638 210 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 ZNF432O94892 652 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 F13BP05160 661 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 FGF2P09038 288 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 CSRP1P21291 193 aaKnown RBP13.64□□□□□ -0.23
LINC00839-202ENST00000429940 SDHAP31040 664 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 KIR2DL1P43626 348 aaPredicted RBP13.64□□□□□ -0.23
LINC00839-202ENST00000429940 EFNB2P52799 333 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 LCN6P62502 163 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 ITPRIPL2Q3MIP1 535 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 ANKRD16Q6P6B7 361 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 C11orf88Q6PI97 169 aa13.64□□□□□ -0.23
LINC00839-202ENST00000429940 TSSK4Q6SA08 328 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms