RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 PINX1Q96BK5 328 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 TVP23CQ96ET8 276 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ABHD14BQ96IU4 210 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ZNF582Q96NG8 517 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 RBP7Q96R05 134 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 UQCR10Q9UDW1 63 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 V9GY05 133 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 TNCP24821 2201 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 SLC22A20A6NK97 555 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 WASH3PC4AMC7 463 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 J3QLW9 94 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 YY2O15391 372 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 HKR1P10072 659 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ZNF19P17023 458 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 OR10J1P30954 320 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 OTX1P32242 354 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 CD80P33681 288 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 HERV-K104P61576 105 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ECH1Q13011 328 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 Q499Y3 187 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 PRAMEF14Q5SWL7 426 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 STEAP1BQ6NZ63 245 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 GRASPQ7Z6J2 395 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 SVIPQ8NHG7 77 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 PPT2Q9UMR5 302 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 CD8B2A6NJW9 211 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 FGF19O95750 216 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 CD8BP10966 210 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 PIGAP37287 484 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ARV1Q9H2C2 271 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 SRA1Q9HD15 236 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 MYOTQ9UBF9 498 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 LOC100509620A0A075B734 347 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ZAR1LA6NP61 321 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 RNASEK-C17orf49H0YIS7 233 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 NDUFS4O43181 175 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 CATSPEREQ5SY80 951 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ZNF626Q68DY1 528 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 TMEM150AQ86TG1 271 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 HUS1BQ8NHY5 278 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 OR5P2Q8WZ92 322 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 DDA1Q9BW61 102 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ELL3Q9HB65 397 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 NSG2Q9Y328 171 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 A0A087WWC5 75 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 A8MUA0 341 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 SIX6O95475 246 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ZNF25P17030 456 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 TCL1AP56279 114 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ELOCQ15369 112 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 EXOSC6Q5RKV6 272 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 GALNTL5Q7Z4T8 443 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 UMODL1-AS1Q8N2C9 162 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 OR5H2Q8NGV7 314 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 GPR87Q9BY21 358 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 RBPJLQ9UBG7 517 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 C13orf42A0A1B0GVH6 325 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 LEFTY2O00292 366 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 SCAMP2O15127 329 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 FPR3P25089 353 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 APEX1P27695 318 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 BCL6P41182 706 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 TMEM244Q5VVB8 128 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 MDGA2Q7Z553 956 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 SERINC5Q86VE9 423 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 KIRREL1Q96J84 757 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 OR5B2Q96R09 309 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 RHOFQ9HBH0 211 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 UBQLN4Q9NRR5 601 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 OR6C6A6NF89 314 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 FTCDNL1E5RQL4 147 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 DEDDO75618 318 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 CSNK1A1P48729 337 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 POU3F4P49335 361 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 SUOXP51687 545 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 PGGHGQ32M88 737 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 SLC35D3Q5M8T2 416 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ZNF362Q5T0B9 420 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 OR5M10Q6IEU7 315 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ADAM5Q6NVV9 412 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 OR2L13Q8N349 312 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 EXD3Q8N9H8 876 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 OR4F15Q8NGB8 312 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ZNF461Q8TAF7 563 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ZCCHC3Q9NUD5 404 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 RCE1Q9Y256 329 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 HIF3AQ9Y2N7 669 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 RAB27BO00194 218 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 RNGTTO60942 597 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 SLC35G6P0C7Q6 338 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 RAB28P51157 221 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 KLF3P57682 345 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 GGNBP1Q5YKI7 109 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 TMIGD1Q6UXZ0 262 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ANAPC16Q96DE5 110 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 AMBRA1Q9C0C7 1298 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 TAF9BQ9HBM6 251 aa6.97□□□□□ -1.29
SYNPO2-202ENST00000429713 ANKUB1A6NFN9 424 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 MCRIP1C9JLW8 97 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 CHRM2P08172 466 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms