RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 CDH10Q9Y6N8 788 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 MCIDASD6RGH6 385 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 G3V2T6 193 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 UPK3AO75631 287 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 TRMUO75648 421 aaKnown RBP13.16□□□□□ -0.3
GARNL3-204ENST00000429629 ITGA5P08648 1049 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 SDHAP31040 664 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 CSNK1A1P48729 337 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 IST1P53990 364 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 PPP1R8Q12972 351 aaKnown RBP13.16□□□□□ -0.3
GARNL3-204ENST00000429629 GABRA6Q16445 453 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 THEM4Q5T1C6 240 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 HMBOX1Q6NT76 420 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 FAHD1Q6P587 224 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 LRFN4Q6PJG9 635 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 MEX3BQ6ZN04 569 aaKnown RBP13.16□□□□□ -0.3
GARNL3-204ENST00000429629 BHLHA15Q7RTS1 189 aaPredicted RBP13.16□□□□□ -0.3
GARNL3-204ENST00000429629 ADCK1Q86TW2 530 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 OR6N1Q8NGY5 312 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 PYDC1Q8WXC3 89 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 LRTOMTQ8WZ04 291 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 NMD3Q96D46 503 aaKnown RBP13.16□□□□□ -0.3
GARNL3-204ENST00000429629 RBP7Q96R05 134 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 SNX18Q96RF0 628 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 KCNK17Q96T54 332 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 POLDIP3Q9BY77 421 aaKnown RBP13.16□□□□□ -0.3
GARNL3-204ENST00000429629 GPR35Q9HC97 309 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 MOV10Q9HCE1 1003 aaKnown RBP13.16□□□□□ -0.3
GARNL3-204ENST00000429629 BAIAP2Q9UQB8 552 aa13.16□□□□□ -0.3
GARNL3-204ENST00000429629 OR5H1A6NKK0 313 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 ZNF99A8MXY4 864 aaPredicted RBP13.15□□□□□ -0.3
GARNL3-204ENST00000429629 IGHV3-9P01782 118 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 COX6B1P14854 86 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 IL32P24001 234 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 CCKARP32238 428 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 ROR2Q01974 943 aaKnown RBP13.15□□□□□ -0.3
GARNL3-204ENST00000429629 CAMK2DQ13557 499 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 C10orf128Q5T292 105 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 ANKRD16Q6P6B7 361 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 THSD4Q6ZMP0 1018 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 PARP8Q8N3A8 854 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 FANK1Q8TC84 345 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 C14orf79Q96F83 325 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 WFIKKN1Q96NZ8 548 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 TSPAN32Q96QS1 320 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 ACTR6Q9GZN1 396 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 GABARAPL1Q9H0R8 117 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 CRLF2Q9HC73 371 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 ZNF226Q9NYT6 803 aa13.15□□□□□ -0.3
GARNL3-204ENST00000429629 INTS1Q8N201 2190 aaKnown RBP13.14□□□□□ -0.31
GARNL3-204ENST00000429629 CIB4A0PJX0 185 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 FAM221AA4D161 298 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 SH3D21A4FU49 640 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 XKRYO14609 159 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 SERPINI2O75830 405 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 ACVR1BP36896 505 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 CLRN1P58418 232 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 ERVK-25P63136 954 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 RUNX1T1Q06455 604 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 LINGO2Q7L985 606 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.14□□□□□ -0.31
GARNL3-204ENST00000429629 AMIGO2Q86SJ2 522 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 WDFY1Q8IWB7 410 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 LNX2Q8N448 690 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 FAM169BQ8N8A8 192 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 OR52L1Q8NGH7 329 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 BCL2L2Q92843 193 aaPredicted RBP13.14□□□□□ -0.31
GARNL3-204ENST00000429629 GTPBP3Q969Y2 492 aaKnown RBP13.14□□□□□ -0.31
GARNL3-204ENST00000429629 SAMD8Q96LT4 415 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 NIPSNAP1Q9BPW8 284 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 ULBP2Q9BZM5 246 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 REV1Q9UBZ9 1251 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 ENOPH1Q9UHY7 261 aa13.14□□□□□ -0.31
GARNL3-204ENST00000429629 PRSS37A4D1T9 235 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 M0R3G1 203 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 BHLHE40O14503 412 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 CASKO14936 926 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 DHHO43323 396 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 LYZL6O75951 148 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 TP53P04637 393 aaPredicted RBP13.13□□□□□ -0.31
GARNL3-204ENST00000429629 QDPRP09417 244 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 OSMP13725 252 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 PRKACGP22612 351 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 ESRRGP62508 458 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 MELKQ14680 651 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 CEACAM16Q2WEN9 425 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 PHYHD1Q5SRE7 291 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 KLHL17Q6TDP4 642 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 DPPA2Q7Z7J5 298 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 ATG16L2Q8NAA4 619 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 NOXO1Q8NFA2 376 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 OR2T33Q8NG76 320 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 OR1K1Q8NGR3 316 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 HDAC2Q92769 488 aaKnown RBP13.13□□□□□ -0.31
GARNL3-204ENST00000429629 STMN2Q93045 179 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 MCHR2Q969V1 340 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 S100PBPQ96BU1 408 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 MUCL1Q96DR8 90 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 Q96M85 177 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 ZNF570Q96NI8 536 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms