RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 FOXRED2Q8IWF2 684 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 ACBD4Q8NC06 268 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 HIST1H2ACQ93077 130 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 KTI12Q96EK9 354 aaPredicted RBP11.36□□□□□ -0.59
CDH3-202ENST00000429102 SPACA5Q96QH8 159 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 MRM2Q9UI43 246 aaKnown RBP11.36□□□□□ -0.59
CDH3-202ENST00000429102 SC5DO75845 299 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 CD226Q15762 336 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 FAM69AQ5T7M9 428 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 GSG1LQ6UXU4 331 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 C16orf52Q8NHV5 167 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 RLN3Q8WXF3 142 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 CMBLQ96DG6 245 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 TMEM106CQ9BVX2 250 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 TINAGL1Q9GZM7 467 aaPredicted RBP11.36□□□□□ -0.59
CDH3-202ENST00000429102 ELOVL3Q9HB03 270 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 INPP5EQ9NRR6 644 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 AKAP7Q9P0M2 348 aaPredicted RBP11.36□□□□□ -0.59
CDH3-202ENST00000429102 PILRAQ9UKJ1 303 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 ENTPD2Q9Y5L3 495 aa11.36□□□□□ -0.59
CDH3-202ENST00000429102 F5H5P2 479 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 OGG1O15527 345 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 WISP1O95388 367 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 HNRNPA1P09651 372 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDH3-202ENST00000429102 MAP3K8P41279 467 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 OR1D4P47884 311 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 RPL13AP3Q6NVV1 102 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 Q6ZSR6 202 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 NUDT18Q6ZVK8 323 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 DND1Q8IYX4 353 aaKnown RBP11.35□□□□□ -0.59
CDH3-202ENST00000429102 SAMD14Q8IZD0 417 aaPredicted RBP11.35□□□□□ -0.59
CDH3-202ENST00000429102 CA13Q8N1Q1 262 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 SLC22A18Q96BI1 424 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 ZNF75AQ96N20 296 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 DGAT2Q96PD7 388 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 IL23AQ9NPF7 189 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 TRAV1-2A0A0B4J238 106 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 ACOT7O00154 380 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 CYR61O00622 381 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 TOR1AO14656 332 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 NMBP08949 121 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 PBX2P40425 430 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 TAGLNQ01995 201 aaKnown RBP11.35□□□□□ -0.59
CDH3-202ENST00000429102 NPSR1Q6W5P4 371 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 MED25Q71SY5 747 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 OR6V1Q8N148 313 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 SLC37A2Q8TED4 501 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 ANKRD9Q96BM1 317 aaPredicted RBP11.35□□□□□ -0.59
CDH3-202ENST00000429102 ZNF524Q96C55 264 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 WDR92Q96MX6 357 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.35□□□□□ -0.59
CDH3-202ENST00000429102 MED11Q9P086 117 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 CPNE7Q9UBL6 633 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 TGFBR3LH3BV60 316 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 LINC01565O15544 149 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 IFNGR1P15260 489 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 TDGQ13569 410 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 DYRK1AQ13627 763 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 ALKBH1Q13686 389 aaKnown RBP11.35□□□□□ -0.59
CDH3-202ENST00000429102 TOMM34Q15785 309 aaPredicted RBP11.35□□□□□ -0.59
CDH3-202ENST00000429102 Q499Y3 187 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 OVCH1Q7RTY7 1134 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 LINC00346Q8IVM7 164 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 TOR1AIP2Q8NFQ8 470 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 OR14A16Q8NHC5 309 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 GPR119Q8TDV5 335 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 COMMD4Q9H0A8 199 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 PPA2Q9H2U2 334 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 POFUT1Q9H488 388 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 PRR13Q9NZ81 148 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 KCNMB2Q9Y691 235 aa11.35□□□□□ -0.59
CDH3-202ENST00000429102 ECDO95905 644 aaPredicted RBP11.34□□□□□ -0.59
CDH3-202ENST00000429102 FREM3P0C091 2139 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 GNALP38405 381 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 LUMP51884 338 aaPredicted RBP11.34□□□□□ -0.59
CDH3-202ENST00000429102 POU4F2Q12837 409 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 CORO6Q6QEF8 472 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 C16orf47Q6ZP98 133 aaPredicted RBP11.34□□□□□ -0.59
CDH3-202ENST00000429102 ZNF546Q86UE3 836 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 SLC25A28Q96A46 364 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 CYYR1Q96J86 154 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 BMFQ96LC9 184 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 SLC16A7O60669 478 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 ALOX12BO75342 701 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 ADH1BP00325 375 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 C2orf76Q3KRA6 126 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 SLC22A6Q4U2R8 563 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 TSSK4Q6SA08 328 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 ZNF227Q86WZ6 799 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 COMMD2Q86X83 199 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 SLC35F3Q8IY50 421 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 BEST3Q8N1M1 668 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 HAVCR2Q8TDQ0 301 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 TMEM231Q9H6L2 316 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 PRTFDC1Q9NRG1 225 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 HEBP2Q9Y5Z4 205 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 OBSL1O75147 1896 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 CXorf51AA0A1B0GTR3 108 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 SLC22A23A1A5C7 686 aa11.34□□□□□ -0.59
CDH3-202ENST00000429102 TMEM235A6NFC5 223 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms